Linking Soil Microbial Diversity to Nitrogen and Phosphorus Dynamics

Changes in the soil microbial community for studies of different novel communities can be promoted by different methodologies, among which soil autoclaving stands out as a quick and readily available tool. However, this procedure may also directly or indirectly alter nitrogen (N) and phosphorus (P) dynamics. The purposes of this study were as follows: (i) to characterize microbial activity after soil autoclaving through microbial <sup>14</sup>CO<sub>2</sub>-respiration; and (ii) to evaluate the effect of microbial manipulation and autoclaving on soil N and <sup>33</sup>P dynamics. For this, two sets of soil samples from two areas (forest and cultivated area) were used in the laboratory. Firstly, <sup>14</sup>C-glucose was added to the soils and after 24 h five soil microbiomes were generated: AS (autoclaved soil), and AS re-inoculated with serial dilutions (<i>w</i>/<i>v</i>) prepared by successive mixing of soil suspensions in sterile deionized water obtaining 10<sup>-1</sup>, 10<sup>-3</sup>, and 10<sup>-6</sup>, which generated the treatments AS + 10<sup>-1</sup>, AS + 10<sup>-3</sup>, and AS + 10<sup>-6</sup>; and the treatment NS (non-autoclaved control), all incubated for 28 d. <sup>14</sup>CO<sub>2</sub> emission was used to characterize microbial activity; additionally, N dynamics were assessed at the end of incubation. In a second assay, <sup>33</sup>P was applied to the soil before autoclaving and re-inoculation. Following further incubation (14 d), a <sup>33</sup>P chemical fractionation was performed. The following are based on the results: (i) <sup>14</sup>CO<sub>2</sub> emission: microbial activity in the autoclaved soil is null, but after a reinoculation of AS + 10<sup>-1</sup> and AS + 10<sup>-3</sup> soil dilution suspension, the <sup>14</sup>CO<sub>2</sub>-respiration is higher than in an NS. (ii) regarding the N dynamics, in autoclaved soils, the microbial levels increased N-NH<sub>4</sub><sup>+</sup> concentration, with an evident increase in the AS + 10<sup>-3</sup> and AS + 10<sup>-1</sup>, and a reduction in the N-NO<sub>3</sub><sup>-</sup> concentration in comparison to the NS. For <sup>33</sup>P, the autoclaving procedure itself reduced the <sup>33</sup>P lability, regardless of the levels of microbial community reinoculated.

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Publication Details

Journal
Microorganisms
Published
2025-10-21
DOI
https://doi.org/10.3390/microorganisms13102401
Primary Topic
Soil Carbon and Nitrogen Dynamics
Type
article
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article

Linking Soil Microbial Diversity to Nitrogen and Phosphorus Dynamics

Wilfrand Ferney Bejarano Herrera, Bruna Arruda, Paulo Sérgio Pavinato, Jéssica Pigatto de Queiroz Barcelos et al.
Microorganisms
Soil Carbon and Nitrogen Dynamics
article

Linking Soil Microbial Diversity to Nitrogen and Phosphorus Dynamics

Wilfrand Ferney Bejarano Herrera, Bruna Arruda, Paulo Sérgio Pavinato, Jéssica Pigatto de Queiroz Barcelos, Fernando Alves de Azevedo, Fernando Ferrari Putti, Eduardo Mariano, Davey L. Jones, Fábio Prataviera, Elizabeth M. Hashimoto
article en

Abstract

Changes in the soil microbial community for studies of different novel communities can be promoted by different methodologies, among which soil autoclaving stands out as a quick and readily available tool. However, this procedure may also directly or indirectly alter nitrogen (N) and phosphorus (P) dynamics. The purposes of this study were as follows: (i) to characterize microbial activity after soil autoclaving through microbial <sup>14</sup>CO<sub>2</sub>-respiration; and (ii) to evaluate the effect of microbial manipulation and autoclaving on soil N and <sup>33</sup>P dynamics. For this, two sets of soil samples from two areas (forest and cultivated area) were used in the laboratory. Firstly, <sup>14</sup>C-glucose was added to the soils and after 24 h five soil microbiomes were generated: AS (autoclaved soil), and AS re-inoculated with serial dilutions (<i>w</i>/<i>v</i>) prepared by successive mixing of soil suspensions in sterile deionized water obtaining 10<sup>-1</sup>, 10<sup>-3</sup>, and 10<sup>-6</sup>, which generated the treatments AS + 10<sup>-1</sup>, AS + 10<sup>-3</sup>, and AS + 10<sup>-6</sup>; and the treatment NS (non-autoclaved control), all incubated for 28 d. <sup>14</sup>CO<sub>2</sub> emission was used to characterize microbial activity; additionally, N dynamics were assessed at the end of incubation. In a second assay, <sup>33</sup>P was applied to the soil before autoclaving and re-inoculation. Following further incubation (14 d), a <sup>33</sup>P chemical fractionation was performed. The following are based on the results: (i) <sup>14</sup>CO<sub>2</sub> emission: microbial activity in the autoclaved soil is null, but after a reinoculation of AS + 10<sup>-1</sup> and AS + 10<sup>-3</sup> soil dilution suspension, the <sup>14</sup>CO<sub>2</sub>-respiration is higher than in an NS. (ii) regarding the N dynamics, in autoclaved soils, the microbial levels increased N-NH<sub>4</sub><sup>+</sup> concentration, with an evident increase in the AS + 10<sup>-3</sup> and AS + 10<sup>-1</sup>, and a reduction in the N-NO<sub>3</sub><sup>-</sup> concentration in comparison to the NS. For <sup>33</sup>P, the autoclaving procedure itself reduced the <sup>33</sup>P lability, regardless of the levels of microbial community reinoculated.

MicroorganismsVol. 13(10)
Universidade Estadual de Londrina (BR), Bangor University (GB), Universidade de São Paulo (BR), University of Applied and Environmental Sciences (CO), Universidade do Oeste Paulista (BR), Colombian Corporation for Agricultural Research - AGROSAVIA (CO), Universidade Estadual Paulista (Unesp) (BR)
Fundação de Amparo à Pesquisa do Estado de São Paulo, Conselho Nacional de Desenvolvimento Científico e Tecnológico, Universidade Estadual Paulista
Openalex Percentile: Top 62%
Soil Carbon and Nitrogen Dynamics
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