Complete genome of Leuconostoc mesenteroides B22051 from Panax ginseng Meyer C. A. in South Korea

We isolated a candidate probiotic strain from Panax ginseng Meyer and decoded the complete genome of L. menseteroides B22051. The complete genome was found to be 1,994,797 bp in size with a guanine + cytosine (G + C) content of 37.7%, and is composed of one chromosome (1,943,350 bp) and two plasmids (37,364 bp and 14,083 bp). Genome annotation revealed 71 transfer RNAs, 24 ribosomal RNAs, and 1,987 coding sequences (CDSs). Furthermore, 98.09% and 64.92% of these 1,987 CDSs were assigned to the COG and Gene Ontology classification systems, respectively. Two partial sequences of vanT (32.61% identity) and vanY (34.36% identity) were detected by CARD v3.2.0 analysis, and although in vitro assays confirmed vancomycin resistance, the low sequence identity and absence of a complete van operon indicate that the resistance is intrinsic rather than acquired. An entero_X_chain_beta gene, associated with Enterocin within Bacteriocin Class IIC (chromosomally encoded), along with 28 reductase genes and one oxidase gene identified through Gene Ontology analysis, is present in L. mesenteroides B22051. These genomic findings confirm the probiotic properties of L. menseteroides B22051.

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Publication Details

Journal
BMC Genomic Data
Published
2025-10-21
DOI
https://doi.org/10.1186/s12863-025-01370-x
Primary Topic
Ginseng Biological Effects and Applications
Type
article
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article

Complete genome of Leuconostoc mesenteroides B22051 from Panax ginseng Meyer C. A. in South Korea

Gwi-Deuk Jin, Ho‐Youn Kim, Eun Bae Kim, Bokyung Lee
BMC Genomic Data
Ginseng Biological Effects and Applications
article

Complete genome of Leuconostoc mesenteroides B22051 from Panax ginseng Meyer C. A. in South Korea

Gwi-Deuk Jin, Ho‐Youn Kim, Eun Bae Kim, Bokyung Lee
article en

Abstract

We isolated a candidate probiotic strain from Panax ginseng Meyer and decoded the complete genome of L. menseteroides B22051. The complete genome was found to be 1,994,797 bp in size with a guanine + cytosine (G + C) content of 37.7%, and is composed of one chromosome (1,943,350 bp) and two plasmids (37,364 bp and 14,083 bp). Genome annotation revealed 71 transfer RNAs, 24 ribosomal RNAs, and 1,987 coding sequences (CDSs). Furthermore, 98.09% and 64.92% of these 1,987 CDSs were assigned to the COG and Gene Ontology classification systems, respectively. Two partial sequences of vanT (32.61% identity) and vanY (34.36% identity) were detected by CARD v3.2.0 analysis, and although in vitro assays confirmed vancomycin resistance, the low sequence identity and absence of a complete van operon indicate that the resistance is intrinsic rather than acquired. An entero_X_chain_beta gene, associated with Enterocin within Bacteriocin Class IIC (chromosomally encoded), along with 28 reductase genes and one oxidase gene identified through Gene Ontology analysis, is present in L. mesenteroides B22051. These genomic findings confirm the probiotic properties of L. menseteroides B22051.

BMC Genomic DataVol. 26(1)
Kangwon National University (KR), Dong-A University (KR), Korea Institute of Science and Technology (KR), Korea University of Science and Technology (KR)
Openalex Percentile: Top 73%
Ginseng Biological Effects and Applications
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