A Bayesian approach towards atomically-precise localization in fluorescence microscopy
Super-resolution microscopy has revolutionized the imaging of complex physical and biological systems by surpassing the Abbe diffraction limit. Recent advancements, particularly in single-molecule localization microscopy, have pushed localization below nanometer precision, by applying prior knowledge of correlated fluorescence emission from single emitters. However, achieving a refinement from 1 nm to 1 Ångström demands a hundred-fold increase in collected photon signal. This quadratic resource scaling imposes a fundamental barrier in single-molecule localization microscopy, where the intense photon collection is challenged by photo-bleaching, prolonged integration times, and inherent practical constraints. Here, we break this limit by harnessing the periodic nature of the atomic lattice structure. Applying this discrete grid imaging technique (DIGIT) in a quantum emitter system, we observe an exponential collapse of localization uncertainty once surpassing the host crystal's atomic lattice constant. We further applied DIGIT to a large-scale quantum emitter array, enabling parallel positioning of each emitter through wide-field imaging. Collectively, these advancements establish DIGIT as a competitive tool for achieving unprecedented, precise measurements, ultimately paving the way to direct optical resolution of crystal and atomic features within quantum and biological systems.
Authors
- Yong Hu (ORCID: https://orcid.org/0000-0003-3360-7856)
- Kevin C. Chen (ORCID: https://orcid.org/0000-0003-0983-192X)
- Qing Gu (ORCID: https://orcid.org/0000-0003-3855-3690)
- Hanfeng Wang (ORCID: https://orcid.org/0000-0003-4299-7649)
- Dirk Englund (ORCID: https://orcid.org/0000-0002-1043-3489)
- Yuqin Duan (ORCID: https://orcid.org/0000-0002-4106-3783)
- Matthew E. Trusheim (ORCID: https://orcid.org/0000-0003-3197-5989)
Institutions
- Vassar College (US)
- DEVCOM Army Research Laboratory (US)
- IIT@MIT (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-10-21
- DOI
- https://doi.org/10.1038/s41467-025-64083-w
- Citations
- 2
- Primary Topic
- Advanced Fluorescence Microscopy Techniques
- Type
- article
- Field-Weighted Citation Impact
- 3.27
Funders
- National Science Foundation
- Massachusetts Institute of Technology
- Division of Materials Research
- Moonshot Research and Development Program