A dataset of chemical reaction pathways incorporating halogen chemistry

Machine learning interatomic potentials (MLIPs) promise to revolutionize computational chemistry; however, their performance depends critically on the quality and diversity of the training data. Existing quantum chemical datasets predominantly focus on equilibrium structures and exhibit limited halogen coverage, despite halogens being present in approximately 25% of pharmaceuticals and numerous materials. We present Halo8, a comprehensive dataset that addresses this gap by systematically incorporating fluorine, chlorine, and bromine chemistry into reaction pathway sampling. Using our efficient multi-level computational workflow, which achieves a 110-fold speedup over pure DFT approaches, Halo8 comprises approximately 20 million quantum chemical calculations from 19,000 unique reaction pathways. The dataset combines recalculated Transition1x reactions with new halogen-containing molecules from GDB-13, employing systematic halogen substitution to maximize chemical diversity. All calculations were performed at the ωB97X-3c level, providing accurate energies, forces, dipole moments, and partial charges. Validation demonstrates that Halo8 captures diverse structural distortions and chemical environments essential for reactive systems, serving as a valuable resource for training MLIPs applicable to pharmaceutical discovery, materials design, and catalysis.

Authors

Institutions

Publication Details

Journal
Scientific Data
Published
2025-10-20
DOI
https://doi.org/10.1038/s41597-025-05944-3
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A dataset of chemical reaction pathways incorporating halogen chemistry

Eunji Sim, Minhyeok Lee, Juyong Lee, Islambek Ashyrmamatov et al.
Scientific Data
Machine Learning in Materials Science
article

A dataset of chemical reaction pathways incorporating halogen chemistry

Eunji Sim, Minhyeok Lee, Juyong Lee, Islambek Ashyrmamatov, Jinyoung Jeong, S. B. Kim, Umit V. Ucaxk
article en

Abstract

Machine learning interatomic potentials (MLIPs) promise to revolutionize computational chemistry; however, their performance depends critically on the quality and diversity of the training data. Existing quantum chemical datasets predominantly focus on equilibrium structures and exhibit limited halogen coverage, despite halogens being present in approximately 25% of pharmaceuticals and numerous materials. We present Halo8, a comprehensive dataset that addresses this gap by systematically incorporating fluorine, chlorine, and bromine chemistry into reaction pathway sampling. Using our efficient multi-level computational workflow, which achieves a 110-fold speedup over pure DFT approaches, Halo8 comprises approximately 20 million quantum chemical calculations from 19,000 unique reaction pathways. The dataset combines recalculated Transition1x reactions with new halogen-containing molecules from GDB-13, employing systematic halogen substitution to maximize chemical diversity. All calculations were performed at the ωB97X-3c level, providing accurate energies, forces, dipole moments, and partial charges. Validation demonstrates that Halo8 captures diverse structural distortions and chemical environments essential for reactive systems, serving as a valuable resource for training MLIPs applicable to pharmaceutical discovery, materials design, and catalysis.

Scientific DataVol. 12(1)
Seoul National University (KR), Yonsei University (KR), National University College (PR)
National Research Foundation, Seoul National University, National Research Foundation of Korea, Korea Environmental Industry and Technology Institute, Institute for Information and Communications Technology Promotion
Openalex Percentile: Top 77%
Machine Learning in Materials Science
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.