Similar Microbial Carbon Limitation with Soil Depth despite Decreasing Carbon Availability

Carbon availability regulates the rate of microbial soil organic matter decay and respiration. However, it remains unclear how much carbon is available to microbes, and if soil organic carbon content influences microbial carbon limitation. Here, the Michaelis-Menten parameters (<i>V</i><sub>max</sub> and <i>k<sub>m</sub></i>) were employed to estimate available carbon and the degree of carbon limitation along soil depth profiles (0-60 cm) at two study sites with varying soil organic carbon content. Available carbon as well as soil organic carbon decreased along soil depth profiles at both sites. Yet, the relative proportion of available carbon to the soil organic carbon did not change across soil depth intervals and sites. Overall, 0.11% (w/w) of soil organic carbon was available to microbes. In addition, the ratio of available carbon to <i>K<sub>m</sub></i>, a proxy for relative carbon limitation, was invariant among soils (0.22 ± 0.03), indicating common carbon limitation. Our results highlight that the Michaelis-Menten model is useful in estimating microbial carbon availability and limitation, that microbes use only a small portion of soil organic carbon at our study sites, and that microbial communities experience similar degrees of carbon limitation regardless of soil organic carbon content.

Authors

Institutions

Publication Details

Journal
Journal of Microbiology and Biotechnology
Published
2025-10-15
DOI
https://doi.org/10.4014/jmb.2506.06002
Primary Topic
Soil Carbon and Nitrogen Dynamics
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Similar Microbial Carbon Limitation with Soil Depth despite Decreasing Carbon Availability

Seung-Won Kim, Kyungjin Min
Journal of Microbiology and Biotechnology
Soil Carbon and Nitrogen Dynamics
article

Similar Microbial Carbon Limitation with Soil Depth despite Decreasing Carbon Availability

Seung-Won Kim, Kyungjin Min
article en

Abstract

Carbon availability regulates the rate of microbial soil organic matter decay and respiration. However, it remains unclear how much carbon is available to microbes, and if soil organic carbon content influences microbial carbon limitation. Here, the Michaelis-Menten parameters (<i>V</i><sub>max</sub> and <i>k<sub>m</sub></i>) were employed to estimate available carbon and the degree of carbon limitation along soil depth profiles (0-60 cm) at two study sites with varying soil organic carbon content. Available carbon as well as soil organic carbon decreased along soil depth profiles at both sites. Yet, the relative proportion of available carbon to the soil organic carbon did not change across soil depth intervals and sites. Overall, 0.11% (w/w) of soil organic carbon was available to microbes. In addition, the ratio of available carbon to <i>K<sub>m</sub></i>, a proxy for relative carbon limitation, was invariant among soils (0.22 ± 0.03), indicating common carbon limitation. Our results highlight that the Michaelis-Menten model is useful in estimating microbial carbon availability and limitation, that microbes use only a small portion of soil organic carbon at our study sites, and that microbial communities experience similar degrees of carbon limitation regardless of soil organic carbon content.

Journal of Microbiology and BiotechnologyVol. 35
Seoul National University (KR)
National Research Foundation, Ministry of Environment, Ministry of Agriculture, Food and Rural Affairs, National Research Foundation of Korea, Korea Environmental Industry and Technology Institute
Openalex Percentile: Top 62%
Soil Carbon and Nitrogen Dynamics
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Similar Microbial Carbon Limitation with Soil Depth despite Decreasing Carbon Availability — Seung-Won Kim, Kyungjin Min · Journal of Microbiology and Biotechnology (2025) | TGRS Research Map | TGRS