Side‐Chain Macrocyclization in Ahp‐Bicyclodepsipeptides Biosynthesis Involves Cytochrome P450‐Catalyzed Sequential Aromatic Hydroxylation and C─N Coupling
We report the biosynthesis of FR901277 (1) and delmomycin A2 (2), two 3-amino-6-hydroxypiperidone (Ahp)-containing bicyclodepsipeptides featuring an N-C bridge linking the citrulline and tyrosine residues. This intriguing side-chain macrocyclization is catalyzed by Dlm16, a cytochrome P450 monooxygenase (CYP450), through a sequential process initiated by ortho-hydroxylation of the tyrosine ring, followed by intramolecular C─N coupling between the resulting catechol moiety and the terminal NH<sub>2</sub> of the ureido group. Structure-function analyses and site-directed mutagenesis confirmed the catalytic importance of identified key residues, enabling the proposal of plausible macrocyclization mechanisms. Functional characterization of eight additional Dlm16 homologs further revealed a CYP450 subfamily capable of catalyzing C─N bond formation, underscoring the prevalence of this unusual macrocyclization in cyclodepsipeptide biosynthesis. Our work highlights nature's strategies for macrocycle construction and provides another example of CYP450-catalyzed C─N coupling via direct C─H functionalization.
Authors
- Niandi Zhang
- Ben Niu (ORCID: https://orcid.org/0000-0001-5822-8743)
- Zhuan Zhang (ORCID: https://orcid.org/0000-0002-3300-3035)
- Jiayi Chen (ORCID: https://orcid.org/0009-0006-9099-8012)
- Zhefei Xu
- Jin Xuan (ORCID: https://orcid.org/0000-0002-6718-9018)
- Qingsong Hu (ORCID: https://orcid.org/0000-0002-8855-3675)
- Song Meng (ORCID: https://orcid.org/0000-0002-6197-7689)
- Tai Huang (ORCID: https://orcid.org/0000-0002-5463-2164)
- Xiaorong Chen (ORCID: https://orcid.org/0000-0001-7202-9636)
- Qiang Dong (ORCID: https://orcid.org/0000-0002-4387-2461)
Institutions
- Chinese Academy of Sciences (CN)
- Chinese Academy of Medical Sciences & Peking Union Medical College (CN)
- Shanghai Institute of Materia Medica (CN)
- University of Chinese Academy of Sciences (CN)
- Southern Medical University (CN)
Publication Details
- Journal
- Angewandte Chemie International Edition
- Published
- 2025-10-18
- DOI
- https://doi.org/10.1002/anie.202513520
- Primary Topic
- Microbial Natural Products and Biosynthesis
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China
- Sun Yat-sen University