Side‐Chain Macrocyclization in Ahp‐Bicyclodepsipeptides Biosynthesis Involves Cytochrome P450‐Catalyzed Sequential Aromatic Hydroxylation and C─N Coupling

Abstract We report the biosynthesis of FR901277 ( 1 ) and delmomycin A2 ( 2 ), two 3‐amino‐6‐hydroxypiperidone (Ahp)‐containing bicyclodepsipeptides featuring an N‐C bridge linking the citrulline and tyrosine residues. This intriguing side‐chain macrocyclization is catalyzed by Dlm16, a cytochrome P450 monooxygenase (CYP450), through a sequential process initiated by ortho‐hydroxylation of the tyrosine ring, followed by intramolecular C─N coupling between the resulting catechol moiety and the terminal NH 2 of the ureido group. Structure‐function analyses and site‐directed mutagenesis confirmed the catalytic importance of identified key residues, enabling the proposal of plausible macrocyclization mechanisms. Functional characterization of eight additional Dlm16 homologs further revealed a CYP450 subfamily capable of catalyzing C─N bond formation, underscoring the prevalence of this unusual macrocyclization in cyclodepsipeptide biosynthesis. Our work highlights nature's strategies for macrocycle construction and provides another example of CYP450‐catalyzed C─N coupling via direct C─H functionalization.

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Publication Details

Journal
Angewandte Chemie
Published
2025-10-18
DOI
https://doi.org/10.1002/ange.202513520
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
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article

Side‐Chain Macrocyclization in Ahp‐Bicyclodepsipeptides Biosynthesis Involves Cytochrome P450‐Catalyzed Sequential Aromatic Hydroxylation and C─N Coupling

Niandi Zhang, Ben Niu, Zhuan Zhang, Jiayi Chen et al.
Angewandte Chemie
Microbial Natural Products and Biosynthesis
article

Side‐Chain Macrocyclization in Ahp‐Bicyclodepsipeptides Biosynthesis Involves Cytochrome P450‐Catalyzed Sequential Aromatic Hydroxylation and C─N Coupling

Niandi Zhang, Ben Niu, Zhuan Zhang, Jiayi Chen, Zhefei Xu, Jin Xuan, Qingsong Hu, Song Meng, Tai Huang, Xiaorong Chen, Qiang Dong
article en

Abstract

Abstract We report the biosynthesis of FR901277 ( 1 ) and delmomycin A2 ( 2 ), two 3‐amino‐6‐hydroxypiperidone (Ahp)‐containing bicyclodepsipeptides featuring an N‐C bridge linking the citrulline and tyrosine residues. This intriguing side‐chain macrocyclization is catalyzed by Dlm16, a cytochrome P450 monooxygenase (CYP450), through a sequential process initiated by ortho‐hydroxylation of the tyrosine ring, followed by intramolecular C─N coupling between the resulting catechol moiety and the terminal NH 2 of the ureido group. Structure‐function analyses and site‐directed mutagenesis confirmed the catalytic importance of identified key residues, enabling the proposal of plausible macrocyclization mechanisms. Functional characterization of eight additional Dlm16 homologs further revealed a CYP450 subfamily capable of catalyzing C─N bond formation, underscoring the prevalence of this unusual macrocyclization in cyclodepsipeptide biosynthesis. Our work highlights nature's strategies for macrocycle construction and provides another example of CYP450‐catalyzed C─N coupling via direct C─H functionalization.

Angewandte ChemieVol. 137(50)
Chinese Academy of Sciences (CN), Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Shanghai Institute of Materia Medica (CN), University of Chinese Academy of Sciences (CN), Southern Medical University (CN)
Openalex Percentile: Top 67%
Microbial Natural Products and Biosynthesis
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