Development and Validation of a 7-eRNA Prognostic Signature for Lung Adenocarcinoma

Enhancer RNAs (eRNAs) are abundant in most human cells and tissues, and quantifying eRNAs has become a robust approach for biomarker discovery. While eRNAs play crucial roles in regulating biological processes and cancer progression, their functions in lung adenocarcinoma (LUAD) remain poorly understood. Here, we developed a LUAD prognostic model based on eRNA expression data from The Cancer Genome Atlas (TCGA). Through rigorous validation, a 7-eRNA signature was identified, which robustly stratified LUAD patients into high-risk and low-risk groups in both training and testing sets. Functional analyses revealed distinct enrichment of pathways related to amino acid biosynthesis, ribosome biogenesis, and proteasome activity in high-risk patients. Somatic mutation profiling highlighted TP53 and TTN as frequently mutated genes, while drug sensitivity prediction identified four potential therapeutic agents (including AZD4547 and Nutlin-3a) for high-risk individuals. Collectively, this study constructed a 7-eRNA prognostic model for LUAD, providing a powerful tool for clinical risk assessment and uncovering eRNA-mediated regulatory mechanisms.

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Publication Details

Journal
Biology
Published
2025-10-17
DOI
https://doi.org/10.3390/biology14101431
Primary Topic
RNA modifications and cancer
Type
article
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article

Development and Validation of a 7-eRNA Prognostic Signature for Lung Adenocarcinoma

Guanmei Chen, Zhigang Fang, Zhijie Hu, Jingkai Zhang et al.
Biology
RNA modifications and cancer
article

Development and Validation of a 7-eRNA Prognostic Signature for Lung Adenocarcinoma

Guanmei Chen, Zhigang Fang, Zhijie Hu, Jingkai Zhang, Keng Chen, Yuanyan Xiong, Yiwen Sun, Mingmei Xiong, Luping Lin, Baolin Liao, Xiaomei Meng
article en

Abstract

Enhancer RNAs (eRNAs) are abundant in most human cells and tissues, and quantifying eRNAs has become a robust approach for biomarker discovery. While eRNAs play crucial roles in regulating biological processes and cancer progression, their functions in lung adenocarcinoma (LUAD) remain poorly understood. Here, we developed a LUAD prognostic model based on eRNA expression data from The Cancer Genome Atlas (TCGA). Through rigorous validation, a 7-eRNA signature was identified, which robustly stratified LUAD patients into high-risk and low-risk groups in both training and testing sets. Functional analyses revealed distinct enrichment of pathways related to amino acid biosynthesis, ribosome biogenesis, and proteasome activity in high-risk patients. Somatic mutation profiling highlighted TP53 and TTN as frequently mutated genes, while drug sensitivity prediction identified four potential therapeutic agents (including AZD4547 and Nutlin-3a) for high-risk individuals. Collectively, this study constructed a 7-eRNA prognostic model for LUAD, providing a powerful tool for clinical risk assessment and uncovering eRNA-mediated regulatory mechanisms.

BiologyVol. 14(10)
Sun Yat-sen University (CN), State Administration of Traditional Chinese Medicine of the People's Republic of China (CN), Key Laboratory of Guangdong Province (CN), State Key Laboratory of Respiratory Disease (CN), Guangzhou Eighth People's Hospital (CN), Guangzhou Medical University (CN)
Openalex Percentile: Top 74%
RNA modifications and cancer
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Development and Validation of a 7-eRNA Prognostic Signature for Lung Adenocarcinoma — Guanmei Chen, Zhigang Fang, et al. · Biology (2025) | TGRS Research Map | TGRS