Assaying the Gel Cell Size through Fluorescence Anisotropy Measurements

Assessment of the gel structure and determination of the limitations of the rotational diffusion in the structural elements (cells) of the gel was achieved through studying changes in the fluorescence anisotropy in a series of luminophores as their molecular sizes and volumes increase. It has been found that small-sized fluorescent probes do not experience noticeable imposition from the gel environment, and the fluorescence anisotropy is quite adequately described by the Levshin-Perrin equation. However, starting from molecular overall size >2.1 nm, rotational diffusion of luminophores becomes stopped, which can be interpreted as the molecules getting stuck in the gel cells. The characteristic size of the dimethyl sulfoxide (DMSO)-MgSO<sub>4</sub> gel cell amounts to 2.3 nm. A modification of the Levshin-Perrin equation is obtained taking into account the statistical parameters of the gel cell.

Authors

Institutions

Publication Details

Journal
The Journal of Physical Chemistry B
Published
2025-10-17
DOI
https://doi.org/10.1021/acs.jpcb.5c04744
Primary Topic
Protein Interaction Studies and Fluorescence Analysis
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Assaying the Gel Cell Size through Fluorescence Anisotropy Measurements

Aleksei V. Trofimov, Ivan D. Burtsev, Yu. B. Tsaplev
The Journal of Physical Chemistry B
Protein Interaction Studies and Fluorescence Analysis
article

Assaying the Gel Cell Size through Fluorescence Anisotropy Measurements

Aleksei V. Trofimov, Ivan D. Burtsev, Yu. B. Tsaplev
article en

Abstract

Assessment of the gel structure and determination of the limitations of the rotational diffusion in the structural elements (cells) of the gel was achieved through studying changes in the fluorescence anisotropy in a series of luminophores as their molecular sizes and volumes increase. It has been found that small-sized fluorescent probes do not experience noticeable imposition from the gel environment, and the fluorescence anisotropy is quite adequately described by the Levshin-Perrin equation. However, starting from molecular overall size >2.1 nm, rotational diffusion of luminophores becomes stopped, which can be interpreted as the molecules getting stuck in the gel cells. The characteristic size of the dimethyl sulfoxide (DMSO)-MgSO<sub>4</sub> gel cell amounts to 2.3 nm. A modification of the Levshin-Perrin equation is obtained taking into account the statistical parameters of the gel cell.

The Journal of Physical Chemistry BVol. 129(43)
Institute of Biochemical Physics NM Emanuel (RU)
Openalex Percentile: Top 74%
Protein Interaction Studies and Fluorescence Analysis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.