AI-Powered Workflow for Constructing Organic Materials Databases from the Literature: Integrating Large Language Models

We developed an end-to-end workflow to automate the construction of materials science databases from published literature, addressing a traditionally manual, time-intensive, and labor-intensive process. The work systematically evaluates and compares different machine learning (ML) methods to optimize each task. For identifying relevant publications, we tested various ML techniques and concluded that a combination of large language model (LLM)-based embeddings, clustering, and direct LLM queries is most effective. In the subsequent data extraction phase, we employed OpenAI's GPT-4 to extract materials and their properties, achieving accuracy comparable to manually curated data sets. Additionally, we integrated AI/ML methods to automatically generate SMILES from chemical structure images, expanding the workflow's applicability to organic materials. To validate the workflow, we applied it to studying organic donor materials in organic photovoltaic devices and benchmarked its performance against a manually curated data set derived from 503 papers. The results demonstrate the workflow's efficiency and accuracy. Finally, based on our findings, we provide recommendations for selecting the best ML methods for each task and propose further improvements for the future tool development. This workflow represents a major advancement in accelerating the development of materials science databases and enables data science applications in a broader range of research topics that were historically infeasible due to the lack of available data sets.

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Publication Details

Journal
ACS Omega
Published
2025-10-16
DOI
https://doi.org/10.1021/acsomega.5c03612
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
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article

AI-Powered Workflow for Constructing Organic Materials Databases from the Literature: Integrating Large Language Models

Akinori Saeki, H. Hu, Adam Alayli, Yue Huang et al.
ACS Omega
Machine Learning in Materials Science
article

AI-Powered Workflow for Constructing Organic Materials Databases from the Literature: Integrating Large Language Models

Akinori Saeki, H. Hu, Adam Alayli, Yue Huang, Henry J. Stirrat
article en

Abstract

We developed an end-to-end workflow to automate the construction of materials science databases from published literature, addressing a traditionally manual, time-intensive, and labor-intensive process. The work systematically evaluates and compares different machine learning (ML) methods to optimize each task. For identifying relevant publications, we tested various ML techniques and concluded that a combination of large language model (LLM)-based embeddings, clustering, and direct LLM queries is most effective. In the subsequent data extraction phase, we employed OpenAI's GPT-4 to extract materials and their properties, achieving accuracy comparable to manually curated data sets. Additionally, we integrated AI/ML methods to automatically generate SMILES from chemical structure images, expanding the workflow's applicability to organic materials. To validate the workflow, we applied it to studying organic donor materials in organic photovoltaic devices and benchmarked its performance against a manually curated data set derived from 503 papers. The results demonstrate the workflow's efficiency and accuracy. Finally, based on our findings, we provide recommendations for selecting the best ML methods for each task and propose further improvements for the future tool development. This workflow represents a major advancement in accelerating the development of materials science databases and enables data science applications in a broader range of research topics that were historically infeasible due to the lack of available data sets.

ACS OmegaVol. 10(42)
University of Washington (US), Tohoku University (JP), University of South Florida (US), University of Washington Applied Physics Laboratory (US), Institute of Molecular Medicine (IN), Green Chemistry (PL), Graduate School USA (US), The University of Osaka (JP)
Openalex Percentile: Top 77%
Machine Learning in Materials Science
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