IntegrAlign: a comprehensive tool for multi-immunofluorescence panel integration through image alignment
IntegrAlign is open-source, implemented in Python, and freely available under the MIT license at https://github.com/CAUXlab/IntegrAlign.
Authors
- Stéphanie Tissot-Renaud (ORCID: https://orcid.org/0000-0003-3080-4598)
- Sylvie Rusakiewicz (ORCID: https://orcid.org/0000-0001-5939-5690)
- Léo Laoubi (ORCID: https://orcid.org/0000-0001-9388-4826)
- Christophe Caux (ORCID: https://orcid.org/0000-0003-2438-833X)
- Anne‐Claire Doffin
- Margaux Hubert (ORCID: https://orcid.org/0000-0003-2584-6494)
- Alexia Gazeu (ORCID: https://orcid.org/0000-0002-2808-3894)
- Nathalie Bendriss‐Vermare (ORCID: https://orcid.org/0000-0002-8771-3585)
- Jean Hausser (ORCID: https://orcid.org/0000-0002-3321-7199)
- Justine Berthet (ORCID: https://orcid.org/0000-0001-6096-263X)
- Marie‐Cécile Michallet (ORCID: https://orcid.org/0000-0001-5860-7460)
- Jenny Valladeau‐Guilemond (ORCID: https://orcid.org/0000-0003-4160-8867)
- Léo Hermet
- Martial Scavino
- Berenice Pillat
Institutions
- Université Claude Bernard Lyon 1 (FR)
- Centre National de la Recherche Scientifique (FR)
- Inserm (FR)
- Lyon College (US)
- BirdLife International (KE)
- Science for Life Laboratory (SE)
- Karolinska Institutet (SE)
- Hôpital Femme Mère Enfant (FR)
- Centre Léon Bérard (FR)
- Centre de Recherche en Cancérologie de Lyon (FR)
- Centre Hospitalier Le Vinatier (FR)
- University of Lausanne (CH)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-10-15
- DOI
- https://doi.org/10.1093/bioinformatics/btaf567
- Primary Topic
- Single-cell and spatial transcriptomics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- European Federation of Pharmaceutical Industries and Associations
- European Commission
- Agence Nationale de la Recherche
- Institut National de la Santé et de la Recherche Médicale
- Fondation ARC pour la Recherche sur le Cancer
- Institut National Du Cancer
- Direction Générale de l’offre de Soins
- LabEx DEvweCAN