Estimation of Local Heterogeneity of Cryo-EM Maps in Direct Space for Type I Pilus from E. coli

The accuracy of resolution estimation of an experimental cryo-EM scattering density map has a decisive effect on the accuracy of determining the uncertainty parameters of atomic positions (ADP parameters), when refined in direct space. The previously developed methodology for local resolution estimation of cryo-EM maps using direct space methods was applied to the study of maps for type I pilus from E. coli. A study of four maps obtained by three groups of researchers showed that, for each of the three standard maps, the resolution can be considered constant and is about 2.6–2.7 Å, while for the sharpened map, the resolution is higher and is equal to 2.3 Å.

Authors

Publication Details

Journal
Mathematical Biology and Bioinformatics
Published
2025-10-13
DOI
https://doi.org/10.17537/2025.20.509
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Estimation of Local Heterogeneity of Cryo-EM Maps in Direct Space for Type I Pilus from E. coli

Vladimir Y. Lunin, Natalia L. Lunina, T.E. Petrova
Mathematical Biology and Bioinformatics
Advanced Electron Microscopy Techniques and Applications
article

Estimation of Local Heterogeneity of Cryo-EM Maps in Direct Space for Type I Pilus from E. coli

Vladimir Y. Lunin, Natalia L. Lunina, T.E. Petrova
article en

Abstract

The accuracy of resolution estimation of an experimental cryo-EM scattering density map has a decisive effect on the accuracy of determining the uncertainty parameters of atomic positions (ADP parameters), when refined in direct space. The previously developed methodology for local resolution estimation of cryo-EM maps using direct space methods was applied to the study of maps for type I pilus from E. coli. A study of four maps obtained by three groups of researchers showed that, for each of the three standard maps, the resolution can be considered constant and is about 2.6–2.7 Å, while for the sharpened map, the resolution is higher and is equal to 2.3 Å.

Mathematical Biology and BioinformaticsVol. 20(2)
Openalex Percentile: Top 87%
Advanced Electron Microscopy Techniques and Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.