Noise Robustness of Transcript-Based Estimators for Properties of Interactions

We investigate the robustness of transcript-based estimators for properties of interactions against various types of noise, ranging from colored noise to isospectral noise. We observe that all estimators are sensitive to symmetric and asymmetric contamination at signal-to-noise ratios that are orders of magnitude higher than those typically encountered in real-world applications. While different coupling regimes can still be distinguished and characterized sufficiently well, the strong impact of noise on the estimator for the direction of interaction can lead to severe misinterpretations of the underlying coupling structure.

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Publication Details

Journal
Entropy
Published
2025-10-14
DOI
https://doi.org/10.3390/e27101067
Citations
1
Primary Topic
Gene Regulatory Network Analysis
Type
article
Field-Weighted Citation Impact
0.81
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article

Noise Robustness of Transcript-Based Estimators for Properties of Interactions

Klaus Lehnertz, Manuel Adams
1 citations
Entropy
Gene Regulatory Network Analysis
0.81
article

Noise Robustness of Transcript-Based Estimators for Properties of Interactions

Klaus Lehnertz, Manuel Adams
article en
1 citations

Abstract

We investigate the robustness of transcript-based estimators for properties of interactions against various types of noise, ranging from colored noise to isospectral noise. We observe that all estimators are sensitive to symmetric and asymmetric contamination at signal-to-noise ratios that are orders of magnitude higher than those typically encountered in real-world applications. While different coupling regimes can still be distinguished and characterized sufficiently well, the strong impact of noise on the estimator for the direction of interaction can lead to severe misinterpretations of the underlying coupling structure.

EntropyVol. 27(10)
University of Bonn (DE), University Hospital Bonn (DE)
Openalex Percentile: Top 23%
Gene Regulatory Network Analysis
0.81
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