The First Report of a Non-Canonical Telomeric Motif in Neuroptera: (TTGGG)n in Chromosomes of Nineta flava (Scopoli, 1763), Chrysopidae

<b>Background:</b> Telomeres are nucleoprotein complexes that maintain chromosome integrity in eukaryotes. In insects, the canonical telomeric repeat (TTAGG)<i>n</i> is considered ancestral, though alternative motifs exist across various orders. Neuroptera, comprising about 5800 species, remains understudied regarding telomeric sequences, with data available for only seven species across three families. Previous studies reported the absence of (TTAGG)<i>n</i> in Chrysopidae species, contrasting with its presence in other Neuroptera families. This study aimed to identify and characterize telomeric motifs in Chrysopidae using chromosome-level genome assemblies and search for retrotransposon insertions. <b>Methods:</b> We analyzed chromosome-level genome assemblies from four Chrysopidae species: three Chrysopinae-<i>Chrysoperla carnea</i> (Stephens, 1836), <i>Chrysopa pallens</i> (Rambur, 1838), and <i>Nineta flava</i> (Scopoli, 1763); and one Nothochrysinae-<i>Nothochrysa capitata</i> (Fabricius, 1793). Terminal sequences of chromosome pseudomolecules were examined using Geneious Prime<sup>®</sup>, applying five specific criteria for optimal telomeric sequence identification. We searched for SART and TRAS retrotransposons using the graphical sequence panel in GenBank. <b>Results:</b> We identified (TTGGG)<i>n</i> as the telomeric motif in <i>N. flava</i>, representing the first report of this pentanucleotide repeat in telomeres of Neuroptera. Arrays ranged from 228 to 8005 bp across seven terminal locations in five chromosome pseudomolecules. In <i>N. capitata</i>, we detected (TTAGG)<i>n</i> arrays (2316-3808 bp) at four terminal locations. No telomeric motifs meeting all criteria were found in <i>C. carnea</i> and <i>C. pallens</i>. No SART/TRAS retrotransposons were detected in any species. <b>Conclusions:</b> This study reveals previously unknown telomeric diversity within Chrysopidae, with both canonical (TTAGG)<i>n</i> and novel (TTGGG)<i>n</i> motifs present. The discovery of (TTGGG)<i>n</i> in Neuroptera expands known telomeric sequence diversity in this order.

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Genes
Published
2025-10-14
DOI
https://doi.org/10.3390/genes16101201
Primary Topic
Fossil Insects in Amber
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article
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article

The First Report of a Non-Canonical Telomeric Motif in Neuroptera: (TTGGG)n in Chromosomes of Nineta flava (Scopoli, 1763), Chrysopidae

Desislava Stoianova, Snejana Grozeva
Genes
Fossil Insects in Amber
article

The First Report of a Non-Canonical Telomeric Motif in Neuroptera: (TTGGG)n in Chromosomes of Nineta flava (Scopoli, 1763), Chrysopidae

Desislava Stoianova, Snejana Grozeva
article en

Abstract

<b>Background:</b> Telomeres are nucleoprotein complexes that maintain chromosome integrity in eukaryotes. In insects, the canonical telomeric repeat (TTAGG)<i>n</i> is considered ancestral, though alternative motifs exist across various orders. Neuroptera, comprising about 5800 species, remains understudied regarding telomeric sequences, with data available for only seven species across three families. Previous studies reported the absence of (TTAGG)<i>n</i> in Chrysopidae species, contrasting with its presence in other Neuroptera families. This study aimed to identify and characterize telomeric motifs in Chrysopidae using chromosome-level genome assemblies and search for retrotransposon insertions. <b>Methods:</b> We analyzed chromosome-level genome assemblies from four Chrysopidae species: three Chrysopinae-<i>Chrysoperla carnea</i> (Stephens, 1836), <i>Chrysopa pallens</i> (Rambur, 1838), and <i>Nineta flava</i> (Scopoli, 1763); and one Nothochrysinae-<i>Nothochrysa capitata</i> (Fabricius, 1793). Terminal sequences of chromosome pseudomolecules were examined using Geneious Prime<sup>®</sup>, applying five specific criteria for optimal telomeric sequence identification. We searched for SART and TRAS retrotransposons using the graphical sequence panel in GenBank. <b>Results:</b> We identified (TTGGG)<i>n</i> as the telomeric motif in <i>N. flava</i>, representing the first report of this pentanucleotide repeat in telomeres of Neuroptera. Arrays ranged from 228 to 8005 bp across seven terminal locations in five chromosome pseudomolecules. In <i>N. capitata</i>, we detected (TTAGG)<i>n</i> arrays (2316-3808 bp) at four terminal locations. No telomeric motifs meeting all criteria were found in <i>C. carnea</i> and <i>C. pallens</i>. No SART/TRAS retrotransposons were detected in any species. <b>Conclusions:</b> This study reveals previously unknown telomeric diversity within Chrysopidae, with both canonical (TTAGG)<i>n</i> and novel (TTGGG)<i>n</i> motifs present. The discovery of (TTGGG)<i>n</i> in Neuroptera expands known telomeric sequence diversity in this order.

GenesVol. 16(10)
Bulgarian Academy of Sciences (BG), Institute of Biodiversity and Ecosystem Research (BG), National Museum of Natural History (BG)
Openalex Percentile: Top 77%
Fossil Insects in Amber
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