Computational identification of FOXP3-associated spatial prognostic markers in HCC via digital pathology

We validated six prognostic spatial markers in HCC and elucidated the dual role of FOXP3 within tumor and stromal compartments, demonstrating the potential of this approach as a practical tool for personalized clinical decision-making in HCC. This study pioneers the computational identification of spatially differential genes at spot-level resolution, offering a cost-effective and scalable approach for spatial biomarker discovery.

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Publication Details

Journal
Computer Methods and Programs in Biomedicine
Published
2025-10-13
DOI
https://doi.org/10.1016/j.cmpb.2025.109119
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

Computational identification of FOXP3-associated spatial prognostic markers in HCC via digital pathology

Fan Zhong, Lei Liu, Yixin Li
Computer Methods and Programs in Biomedicine
Single-cell and spatial transcriptomics
article

Computational identification of FOXP3-associated spatial prognostic markers in HCC via digital pathology

Fan Zhong, Lei Liu, Yixin Li
article en

Abstract

We validated six prognostic spatial markers in HCC and elucidated the dual role of FOXP3 within tumor and stromal compartments, demonstrating the potential of this approach as a practical tool for personalized clinical decision-making in HCC. This study pioneers the computational identification of spatially differential genes at spot-level resolution, offering a cost-effective and scalable approach for spatial biomarker discovery.

Computer Methods and Programs in BiomedicineVol. 273
Fudan University (CN)
Openalex Percentile: Top 74%
Single-cell and spatial transcriptomics
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