LP-4P: Link Prediction over Annotated Knowledge Graphs with Four Patterns

Initially designed for Knowledge Graphs (KG) containing plain (s, p, o) triples, research on link prediction has evolved to address more complex structures such as hypergraphs, hyper-relational graphs, and bi-level graphs. These advancements push link prediction to handle annotation patterns where a triple is annotated with another (t, p, t), or where a triple is annotated with qualifiers (t, p, o). However, each approach focuses on a single annotation pattern, and the case where a triple is annotated with a subject (s, p, t) has never been explored. In this paper, we propose LP4P, the first link prediction model capable of predicting entities in both plain triples and three annotation patterns. LP4P captures the information expressed in annotations through a four-pattern attention layer, and its loss function further leverages the ontological information of KGs. Moreover, we built WD4P, an RDF KG derived from baseline datasets, which includes the four patterns. Extensive empirical evaluations demonstrate that LP4P outperforms relevant state-of-the-art models on knowledge graphs with the four patterns, and achieves comparable performance on standard benchmarks.

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Published
2025-12-09
DOI
https://doi.org/10.1145/3731443.3771353
Primary Topic
Advanced Graph Neural Networks
Type
article
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article

LP-4P: Link Prediction over Annotated Knowledge Graphs with Four Patterns

Khalid Belhajjame, Manoé Kieffer, Patricia Serrano-Alvarado, Hugo Chabane
Advanced Graph Neural Networks
article

LP-4P: Link Prediction over Annotated Knowledge Graphs with Four Patterns

Khalid Belhajjame, Manoé Kieffer, Patricia Serrano-Alvarado, Hugo Chabane
article en

Abstract

Initially designed for Knowledge Graphs (KG) containing plain (s, p, o) triples, research on link prediction has evolved to address more complex structures such as hypergraphs, hyper-relational graphs, and bi-level graphs. These advancements push link prediction to handle annotation patterns where a triple is annotated with another (t, p, t), or where a triple is annotated with qualifiers (t, p, o). However, each approach focuses on a single annotation pattern, and the case where a triple is annotated with a subject (s, p, t) has never been explored. In this paper, we propose LP4P, the first link prediction model capable of predicting entities in both plain triples and three annotation patterns. LP4P captures the information expressed in annotations through a four-pattern attention layer, and its loss function further leverages the ontological information of KGs. Moreover, we built WD4P, an RDF KG derived from baseline datasets, which includes the four patterns. Extensive empirical evaluations demonstrate that LP4P outperforms relevant state-of-the-art models on knowledge graphs with the four patterns, and achieves comparable performance on standard benchmarks.

École Centrale de Nantes (FR), Centre National de la Recherche Scientifique (FR), Laboratoire des Sciences du Numérique de Nantes (FR), Lamsade (FR), Université Paris Dauphine-PSL (FR), Nantes Université (FR)
Openalex Percentile: Top 85%
Advanced Graph Neural Networks
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