Diverse Members of the Phylum Armatimonadota Promote the Growth of Aquatic Plants, Duckweeds

Duckweeds are small, fast-growing aquatic plants with high starch and protein content, making them promising candidates for next-generation plant biomass resources. Despite their importance, little is known about their interactions with microorganisms, particularly plant growth-promoting bacteria (PGPB), which play key roles in enhancing plant productivity. In this study, we report the plant growth-promoting effects of strain LA-C6, a member of the phylum <i>Armatimonadota</i>, isolated from duckweed fronds. Based on 16S rRNA gene analysis, this strain represents a novel genus-level lineage, and is referred to as <i>Fimbriimonadaceae</i> bacterium strain LA-C6. In axenic co-culture experiments, strain LA-C6 promoted duckweed growth, increasing the frond proliferation of four duckweed species (<i>Lemna minor</i>, <i>Lemna aequinoctialis</i>, <i>Spirodela polyrhiza</i>, and <i>Landoltia punctata</i>) by 1.8- to 4.0-fold compared with uninoculated controls. Importantly, three other phylogenetically distinct <i>Armatimonadota</i> species also exhibited significant plant growth-promoting effects on <i>L. minor</i>, increasing frond number by up to 2.3-fold and dry weight by up to 2.4-fold. This finding highlights the broader potential of diverse <i>Armatimonadota</i> members as PGP bacteria. A survey of the IMNGS database showed that strain LA-C6 and other <i>Armatimonadota</i> species are widely distributed across diverse plant-associated environments. Biochemical assays and gene prediction analyses revealed that strain LA-C6 produces indole-3-acetic acid (IAA) as a representative PGP trait, whereas no additional PGP-associated traits were detected. These results suggest that diverse bacterial lineages within the phylum <i>Armatimonadota</i> exert growth-promoting effects on aquatic plants, potentially through yet-to-be-identified mechanisms.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2025-10-09
DOI
https://doi.org/10.3390/ijms26199824
Primary Topic
Constructed Wetlands for Wastewater Treatment
Type
article
Field-Weighted Citation Impact
0.00

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article

Diverse Members of the Phylum Armatimonadota Promote the Growth of Aquatic Plants, Duckweeds

Yoichi Kamagata, Kazuhiro Mori, Hideyuki Tamaki, Tomoki Iwashita et al.
International Journal of Molecular Sciences
Constructed Wetlands for Wastewater Treatment
article

Diverse Members of the Phylum Armatimonadota Promote the Growth of Aquatic Plants, Duckweeds

Yoichi Kamagata, Kazuhiro Mori, Hideyuki Tamaki, Tomoki Iwashita, Tadashi Toyama, Ayaka Makino, Ryosuke Nakai, Yasuhiro Tanaka, Yasuko Yoneda
article en

Abstract

Duckweeds are small, fast-growing aquatic plants with high starch and protein content, making them promising candidates for next-generation plant biomass resources. Despite their importance, little is known about their interactions with microorganisms, particularly plant growth-promoting bacteria (PGPB), which play key roles in enhancing plant productivity. In this study, we report the plant growth-promoting effects of strain LA-C6, a member of the phylum <i>Armatimonadota</i>, isolated from duckweed fronds. Based on 16S rRNA gene analysis, this strain represents a novel genus-level lineage, and is referred to as <i>Fimbriimonadaceae</i> bacterium strain LA-C6. In axenic co-culture experiments, strain LA-C6 promoted duckweed growth, increasing the frond proliferation of four duckweed species (<i>Lemna minor</i>, <i>Lemna aequinoctialis</i>, <i>Spirodela polyrhiza</i>, and <i>Landoltia punctata</i>) by 1.8- to 4.0-fold compared with uninoculated controls. Importantly, three other phylogenetically distinct <i>Armatimonadota</i> species also exhibited significant plant growth-promoting effects on <i>L. minor</i>, increasing frond number by up to 2.3-fold and dry weight by up to 2.4-fold. This finding highlights the broader potential of diverse <i>Armatimonadota</i> members as PGP bacteria. A survey of the IMNGS database showed that strain LA-C6 and other <i>Armatimonadota</i> species are widely distributed across diverse plant-associated environments. Biochemical assays and gene prediction analyses revealed that strain LA-C6 produces indole-3-acetic acid (IAA) as a representative PGP trait, whereas no additional PGP-associated traits were detected. These results suggest that diverse bacterial lineages within the phylum <i>Armatimonadota</i> exert growth-promoting effects on aquatic plants, potentially through yet-to-be-identified mechanisms.

International Journal of Molecular SciencesVol. 26(19)
Hokkaido Research Organization (JP), University of Yamanashi (JP), National Institute of Advanced Industrial Science and Technology (JP)
Cabinet Office, Government of Japan, Japan Science and Technology Agency, Advanced Low Carbon Technology Research and Development Program
Openalex Percentile: Top 65%
Constructed Wetlands for Wastewater Treatment
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