Generation of multiplex tRNA-gRNA constructs for Marchantia polymorpha CRISPR v1

This protocol describes a Marchantia polymorpha specific modification of the Xie et al 2015 protocol(https://doi.org/10.1073/pnas.1420294112) for the synthesis of multicomplex tRNA-gRNA modules by Golden Gate Assembly/Loop Assembly. It has 3 main steps: A. Primer design and PCR amplification of tRNA-gRNA fragments using the pGTR plasmid as the template. B. Loop assembly cloning of the amplified tRNA-gRNA fragments into an L1 vector,to combine them with the MpU6 promoter C. Loop assembly cloning into the L2 pCsA acceptor vector to combine the MpU6::tRNA-gRNA unit with the transcription unit for Cas9 expression

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Publication Details

Published
2025-09-15
DOI
https://doi.org/10.17504/protocols.io.q26g7nx78lwz/v1
Citations
1
Primary Topic
Protist diversity and phylogeny
Type
article
Field-Weighted Citation Impact
0.81
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article

Generation of multiplex tRNA-gRNA constructs for Marchantia polymorpha CRISPR v1

Eftychis Frangedakis
1 citations
Protist diversity and phylogeny
0.81
article

Generation of multiplex tRNA-gRNA constructs for Marchantia polymorpha CRISPR v1

Eftychis Frangedakis
article en
1 citations

Abstract

This protocol describes a Marchantia polymorpha specific modification of the Xie et al 2015 protocol(https://doi.org/10.1073/pnas.1420294112) for the synthesis of multicomplex tRNA-gRNA modules by Golden Gate Assembly/Loop Assembly. It has 3 main steps: A. Primer design and PCR amplification of tRNA-gRNA fragments using the pGTR plasmid as the template. B. Loop assembly cloning of the amplified tRNA-gRNA fragments into an L1 vector,to combine them with the MpU6 promoter C. Loop assembly cloning into the L2 pCsA acceptor vector to combine the MpU6::tRNA-gRNA unit with the transcription unit for Cas9 expression

Openalex Percentile: Top 23%
Protist diversity and phylogeny
0.81
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Generation of multiplex tRNA-gRNA constructs for Marchantia polymorpha CRISPR v1 — Eftychis Frangedakis · (2025) | TGRS Research Map | TGRS