WHFDL: an explainable method based on World Hyper-heuristic and Fuzzy Deep Learning approaches for gastric cancer detection using metabolomics data

The performance of WHFDL was assessed and compared against a comprehensive set of classical and state-of-the-art feature selection and classification algorithms. Our results highlighted six key metabolites as biomarkers associated with gastric cancer: (1-Methyladenosine, C18-Carnitine, Guanidineacetic acid, Hypoxanthine, Nicotinamide mononucleotide, and Succinate). The WHFDL outperformed all other classifiers, achieving an F1-score, recall and precision of 94%, 93% and 94%, respectively, along with an accuracy of 94% and an Area Under the Curve of 0.9384. Interpretability were analyzed using SHAP, LIME, IG calibration analysis, and adversarial testing, demonstrating the model's transparency. The source code is available on ( https://github.com/arman-daliri/WHFDL ).

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Publication Details

Journal
BioData Mining
Published
2025-10-10
DOI
https://doi.org/10.1186/s13040-025-00486-1
Primary Topic
Traditional Chinese Medicine Studies
Type
article
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article

WHFDL: an explainable method based on World Hyper-heuristic and Fuzzy Deep Learning approaches for gastric cancer detection using metabolomics data

Nazanin Mahdavi, Arman Daliri, Mahdieh Zabihimayvan, Ali Zarrabi et al.
BioData Mining
Traditional Chinese Medicine Studies
article

WHFDL: an explainable method based on World Hyper-heuristic and Fuzzy Deep Learning approaches for gastric cancer detection using metabolomics data

Nazanin Mahdavi, Arman Daliri, Mahdieh Zabihimayvan, Ali Zarrabi, Reza Sadeghi, M. Afzal Mir, Yalda Yaghooti, Parastoo Ghazanfari, Pedram Khalaj
article en

Abstract

The performance of WHFDL was assessed and compared against a comprehensive set of classical and state-of-the-art feature selection and classification algorithms. Our results highlighted six key metabolites as biomarkers associated with gastric cancer: (1-Methyladenosine, C18-Carnitine, Guanidineacetic acid, Hypoxanthine, Nicotinamide mononucleotide, and Succinate). The WHFDL outperformed all other classifiers, achieving an F1-score, recall and precision of 94%, 93% and 94%, respectively, along with an accuracy of 94% and an Area Under the Curve of 0.9384. Interpretability were analyzed using SHAP, LIME, IG calibration analysis, and adversarial testing, demonstrating the model's transparency. The source code is available on ( https://github.com/arman-daliri/WHFDL ).

BioData MiningVol. 18(1)
Central Connecticut State University (US), Islamic Azad University, Karaj (IR), Tehran University of Medical Sciences (IR), Marist University (US)
Openalex Percentile: Top 56%
Traditional Chinese Medicine Studies
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