PixelINR: Scan-specific self-supervised MRI reconstruction based on implicit neural representations

Accelerated MRI involves a trade-off between sampling sufficiency and acquisition time. Although supervised and self-supervised deep learning approaches have shown promise in reconstructing under-sampled MR images, they typically rely on large-scale training datasets. This dependence increases the risk of overfitting and hallucinated features, particularly when training data diverges from test-time distributions. In this paper, we propose PixelINR, a scan-specific, self-supervised reconstruction method based on implicit neural representations (INR) that requires only a single under-sampled scan for training. By eliminating the need for external training databases, scan-specific PixelINR mitigates hallucination risks and improves generalization to diverse acquisition settings. To further enhance image quality, we incorporate anti-blurriness regularization in the image domain and a frequency-domain inpainting loss, guiding the model to recover sharp structures and plausible k-space content. Experimental results demonstrate that PixelINR outperforms existing scan-specific approaches in both reconstruction accuracy and robustness. Our implementation is publicly available at: https://github.com/YSongxiao/PixelINR . • Use INR for enhancing single-coil MRI reconstruction. • A versatile, scan-specific deep learning method applicable to various MRIs. • Anti-blurriness regularization and frequency-domain inpainting can reduce blurriness.

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Publication Details

Journal
Biomedical Signal Processing and Control
Published
2025-10-10
DOI
https://doi.org/10.1016/j.bspc.2025.108838
Primary Topic
Advanced MRI Techniques and Applications
Type
article
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article

PixelINR: Scan-specific self-supervised MRI reconstruction based on implicit neural representations

Songxiao Yang, Masatoshi Okutomi, Yafei Ou
Biomedical Signal Processing and Control
Advanced MRI Techniques and Applications
article

PixelINR: Scan-specific self-supervised MRI reconstruction based on implicit neural representations

Songxiao Yang, Masatoshi Okutomi, Yafei Ou
article en

Abstract

Accelerated MRI involves a trade-off between sampling sufficiency and acquisition time. Although supervised and self-supervised deep learning approaches have shown promise in reconstructing under-sampled MR images, they typically rely on large-scale training datasets. This dependence increases the risk of overfitting and hallucinated features, particularly when training data diverges from test-time distributions. In this paper, we propose PixelINR, a scan-specific, self-supervised reconstruction method based on implicit neural representations (INR) that requires only a single under-sampled scan for training. By eliminating the need for external training databases, scan-specific PixelINR mitigates hallucination risks and improves generalization to diverse acquisition settings. To further enhance image quality, we incorporate anti-blurriness regularization in the image domain and a frequency-domain inpainting loss, guiding the model to recover sharp structures and plausible k-space content. Experimental results demonstrate that PixelINR outperforms existing scan-specific approaches in both reconstruction accuracy and robustness. Our implementation is publicly available at: https://github.com/YSongxiao/PixelINR . • Use INR for enhancing single-coil MRI reconstruction. • A versatile, scan-specific deep learning method applicable to various MRIs. • Anti-blurriness regularization and frequency-domain inpainting can reduce blurriness.

Biomedical Signal Processing and ControlVol. 112
Tokyo Institute of Technology (JP), Innovative Research (United States) (US)
Openalex Percentile: Top 58%
Advanced MRI Techniques and Applications
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PixelINR: Scan-specific self-supervised MRI reconstruction based on implicit neural representations — Songxiao Yang, Masatoshi Okutomi, et al. · Biomedical Signal Processing and Control (2025) | TGRS Research Map | TGRS