Marcus cross relation in the space of H-atom abstraction reactions boosted through off-diagonal thermodynamics

Proton-coupled electron transfer (PCET) and hydrogen-atom transfer (HAT) reactions, collectively called H-atom abstraction (HAA) reactions, play critical roles in biological processes and modern organic synthesis. The kinetics of these processes can align with the principles described in the renowned Marcus cross relation (MCR), a framework initially formulated to describe electron transfer mechanisms. The MCR provides an outstanding link between the kinetics of HAA reactions involving two distinct reactants and two related auxiliary self-exchange reactions-each between a molecule of one of the reactants and its conjugated radical. In this study, we investigate the applicability and limitations of the canonical MCR across over 300 HAA reactions, providing a comprehensive theoretical analysis. Our findings reveal the need for an enhanced framework that incorporates "off-diagonal" thermodynamic factors-asynchronicity and frustration. Of these factors, asynchronicity, which quantifies the imbalance between the proton vs electron transfer components of the reaction, is identified as the dominant contributor to the improved predictive accuracy of the MCR. Notably, the incorporation of off-diagonal thermodynamics yields a more pronounced enhancement for HAT reactions than for PCET-like HAA reactions. As a corollary, the model also describes a so-called pseudoinverted region, in which more exergonic reactions feature higher free energy barriers even though the thermodynamic driving force is not so large as it is required for the proper inverted region well-known from the original Marcus theory. This advancement offers a refined theoretical basis for understanding H-atom abstraction mechanisms and underscores the importance of off-diagonal effects in HAA chemistry.

Authors

Institutions

Publication Details

Journal
The Journal of Chemical Physics
Published
2025-10-09
DOI
https://doi.org/10.1063/5.0289063
Citations
1
Primary Topic
Free Radicals and Antioxidants
Type
article
Field-Weighted Citation Impact
0.94

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Marcus cross relation in the space of H-atom abstraction reactions boosted through off-diagonal thermodynamics

Zuzanna Wojdyła, Radek Fučík, Erik Andris, Jishnu Sai Gopinath et al.
1 citations
The Journal of Chemical Physics
Free Radicals and Antioxidants
0.94
article

Marcus cross relation in the space of H-atom abstraction reactions boosted through off-diagonal thermodynamics

Zuzanna Wojdyła, Radek Fučík, Erik Andris, Jishnu Sai Gopinath, Jakub Klinkovský, Martin Srnec, Jan Kovář
article en
1 citations

Abstract

Proton-coupled electron transfer (PCET) and hydrogen-atom transfer (HAT) reactions, collectively called H-atom abstraction (HAA) reactions, play critical roles in biological processes and modern organic synthesis. The kinetics of these processes can align with the principles described in the renowned Marcus cross relation (MCR), a framework initially formulated to describe electron transfer mechanisms. The MCR provides an outstanding link between the kinetics of HAA reactions involving two distinct reactants and two related auxiliary self-exchange reactions-each between a molecule of one of the reactants and its conjugated radical. In this study, we investigate the applicability and limitations of the canonical MCR across over 300 HAA reactions, providing a comprehensive theoretical analysis. Our findings reveal the need for an enhanced framework that incorporates "off-diagonal" thermodynamic factors-asynchronicity and frustration. Of these factors, asynchronicity, which quantifies the imbalance between the proton vs electron transfer components of the reaction, is identified as the dominant contributor to the improved predictive accuracy of the MCR. Notably, the incorporation of off-diagonal thermodynamics yields a more pronounced enhancement for HAT reactions than for PCET-like HAA reactions. As a corollary, the model also describes a so-called pseudoinverted region, in which more exergonic reactions feature higher free energy barriers even though the thermodynamic driving force is not so large as it is required for the proper inverted region well-known from the original Marcus theory. This advancement offers a refined theoretical basis for understanding H-atom abstraction mechanisms and underscores the importance of off-diagonal effects in HAA chemistry.

The Journal of Chemical PhysicsVol. 163(14)
Czech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry (CZ), Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry (CZ), Czech Technical University in Prague (CZ)
České Vysoké Učení Technické v Praze, Grantová Agentura České Republiky, Akademie Věd České Republiky
Openalex Percentile: Top 21%
Free Radicals and Antioxidants
0.94
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.