Performance of a high-order MPI-Kokkos accelerated fluid solver

This work discusses the performance of a modern numerical scheme for fluid dynamical problems on modern high-performance computing (HPC) architectures. Our code implements a spatial nodal discontinuous Galerkin (NDG) scheme that we test up to an order of convergence of eight. It is temporally coupled to a set of Runge-Kutta (RK) methods of orders up to six. The code integrates the linear advection equations as well as the isothermal Euler equations in one, two, and three dimensions. In order to target modern hardware involving many-core Central Processing Units (CPUs) and accelerators such as Graphic Processing Units (GPUs) we use the Kokkos library in conjunction with the Message Passing Interface (MPI) to run our single source code on various NVidia and AMD GPU systems. By means of one- and two-dimensional simulations of simple test equations we find that the higher the order the faster is the code. Eighth-order simulations attain a given global error with much less computing time than third- or fourth-order simulations. The RK scheme has a smaller impact on the code performance and a classical fourth-order scheme seems to generally be a good choice. The code performs very well on all considered HPC GPUs. We observe very good scaling properties up to 64 AMD MI250x GPUs and we show that the scaling properties are the same in two and three dimensions. The many-CPU performance is also very good and perfect weak scaling is observed up to many hundreds of CPU cores using MPI. We note that small grid-size simulations are faster on CPUs than on GPUs while GPUs win significantly over CPUs for simulations involving more than 10 7 degrees of freedom ( ≈ 3100 2 grid points). When it comes to the environmental impact of numerical simulations we estimate that GPUs consume less energy than CPUs for large grid-size simulations but more energy on small grids. Further, we observe a tendency that the more modern is the GPU the larger needs to be the grid in order to use it efficiently. This yields a rebound effect because larger simulations need longer computing times and in turn more energy that is not compensated by the energy efficiency gain of the newer GPUs.

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Publication Details

Journal
Computer Physics Communications
Published
2025-09-25
DOI
https://doi.org/10.1016/j.cpc.2025.109873
Primary Topic
Magnetic confinement fusion research
Type
article
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article

Performance of a high-order MPI-Kokkos accelerated fluid solver

Holger Homann, Filipp Sporykhin
Computer Physics Communications
Magnetic confinement fusion research
article

Performance of a high-order MPI-Kokkos accelerated fluid solver

Holger Homann, Filipp Sporykhin
article en

Abstract

This work discusses the performance of a modern numerical scheme for fluid dynamical problems on modern high-performance computing (HPC) architectures. Our code implements a spatial nodal discontinuous Galerkin (NDG) scheme that we test up to an order of convergence of eight. It is temporally coupled to a set of Runge-Kutta (RK) methods of orders up to six. The code integrates the linear advection equations as well as the isothermal Euler equations in one, two, and three dimensions. In order to target modern hardware involving many-core Central Processing Units (CPUs) and accelerators such as Graphic Processing Units (GPUs) we use the Kokkos library in conjunction with the Message Passing Interface (MPI) to run our single source code on various NVidia and AMD GPU systems. By means of one- and two-dimensional simulations of simple test equations we find that the higher the order the faster is the code. Eighth-order simulations attain a given global error with much less computing time than third- or fourth-order simulations. The RK scheme has a smaller impact on the code performance and a classical fourth-order scheme seems to generally be a good choice. The code performs very well on all considered HPC GPUs. We observe very good scaling properties up to 64 AMD MI250x GPUs and we show that the scaling properties are the same in two and three dimensions. The many-CPU performance is also very good and perfect weak scaling is observed up to many hundreds of CPU cores using MPI. We note that small grid-size simulations are faster on CPUs than on GPUs while GPUs win significantly over CPUs for simulations involving more than 10 7 degrees of freedom ( ≈ 3100 2 grid points). When it comes to the environmental impact of numerical simulations we estimate that GPUs consume less energy than CPUs for large grid-size simulations but more energy on small grids. Further, we observe a tendency that the more modern is the GPU the larger needs to be the grid in order to use it efficiently. This yields a rebound effect because larger simulations need longer computing times and in turn more energy that is not compensated by the energy efficiency gain of the newer GPUs.

Computer Physics CommunicationsVol. 318
Centre National de la Recherche Scientifique (FR), Université Côte d'Azur (FR), Observatoire de la Côte d’Azur (FR)
Openalex Percentile: Top 87%
Magnetic confinement fusion research
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