DNA damage induces p53-dependent activation of the lncRNA TCERG1L-AS1 to regulate cell proliferation

While long non-coding RNAs (lncRNAs) are increasingly recognized as critical regulators in stress responses, a systematic characterization of those regulated by p53 has remained incomplete. In this study, we adopted an integrative strategy that combined curated p53 ChIP-seq data with publicly available transcriptome profiles to identify lncRNAs potentially regulated by p53. Among these, we identified TCERG1L-AS1, a lncRNA whose promoter region contains canonical p53-binding motifs, as also demonstrated by luciferase reporter assays. TCERG1L-AS1 expression is specifically induced under genotoxic and oxidative stress, but not in response to metabolic stress, and its induction is dependent on functional p53. Functionally, enforced expression of TCERG1L-AS1 triggers G1-phase arrest and inhibits cellular proliferation and migration, as shown by flow cytometry, MTT, wound healing, and transwell migration assays. Transcriptome-wide analyses following TCERG1L-AS1 overexpression or silencing did not identify a consistent downstream effector, supporting emerging models in which certain lncRNAs act through indirect or scaffold-based mechanisms. Collectively, these findings establish TCERG1L-AS1 as a novel p53-regulated lncRNA with functional significance in tumor suppression and cellular stress responses.

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Publication Details

Journal
Biochimie
Published
2025-10-08
DOI
https://doi.org/10.1016/j.biochi.2025.10.002
Primary Topic
Cancer-related molecular mechanisms research
Type
article
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article

DNA damage induces p53-dependent activation of the lncRNA TCERG1L-AS1 to regulate cell proliferation

Debi P. Sarkar, Nidhi Chourasia, Madhur Sharma, Alo Nag et al.
Biochimie
Cancer-related molecular mechanisms research
article

DNA damage induces p53-dependent activation of the lncRNA TCERG1L-AS1 to regulate cell proliferation

Debi P. Sarkar, Nidhi Chourasia, Madhur Sharma, Alo Nag, Priyanka Priyanka, Sandeep Saxena
article en

Abstract

While long non-coding RNAs (lncRNAs) are increasingly recognized as critical regulators in stress responses, a systematic characterization of those regulated by p53 has remained incomplete. In this study, we adopted an integrative strategy that combined curated p53 ChIP-seq data with publicly available transcriptome profiles to identify lncRNAs potentially regulated by p53. Among these, we identified TCERG1L-AS1, a lncRNA whose promoter region contains canonical p53-binding motifs, as also demonstrated by luciferase reporter assays. TCERG1L-AS1 expression is specifically induced under genotoxic and oxidative stress, but not in response to metabolic stress, and its induction is dependent on functional p53. Functionally, enforced expression of TCERG1L-AS1 triggers G1-phase arrest and inhibits cellular proliferation and migration, as shown by flow cytometry, MTT, wound healing, and transwell migration assays. Transcriptome-wide analyses following TCERG1L-AS1 overexpression or silencing did not identify a consistent downstream effector, supporting emerging models in which certain lncRNAs act through indirect or scaffold-based mechanisms. Collectively, these findings establish TCERG1L-AS1 as a novel p53-regulated lncRNA with functional significance in tumor suppression and cellular stress responses.

BiochimieVol. 240
University of Delhi (IN), Jawaharlal Nehru University (IN), Indian Institute of Technology Gandhinagar (IN), University of California San Diego (US)
Openalex Percentile: Top 65%
Cancer-related molecular mechanisms research
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DNA damage induces p53-dependent activation of the lncRNA TCERG1L-AS1 to regulate cell proliferation — Debi P. Sarkar, Nidhi Chourasia, et al. · Biochimie (2025) | TGRS Research Map | TGRS