Are we there yet? Adventures on a road trip through machine learning as a computational chemist

Over the past two decades, the integration of machine learning (ML) into theoretical and computational chemistry has transformed the scale and scope of discovery that is possible on a computer. In this Perspective, I share my personal journey from early density functional theory method development for small transition metal complexes to the building of automated workflows and ML models for catalysis, redox chemistry, and materials design. I will describe my unlikely path toward machine learning starting from minimal models of catalysts and the use of structural databases to gain data-driven insights. I will then describe our experiences in training machine learning models for discovery, including active learning and descriptor-based approaches that enabled data-driven exploration despite limited experimental reference data for open-shell transition metal complexes. As an example of overcoming these limitations, I will describe our more recent efforts that culminated in experimental validation of our computational predictions. Along the way, challenges in data curation, DFT method sensitivity, and synthetic realism have shaped the trajectory of the field. I conclude with reflections on the rapid rise of generative AI, agentic workflows, and the enduring need to ask questions that truly advance molecular discovery.

Authors

Institutions

Publication Details

Journal
APL Computational Physics
Published
2025-10-08
DOI
https://doi.org/10.1063/5.0297853
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Are we there yet? Adventures on a road trip through machine learning as a computational chemist

Heather Janine Kulik
APL Computational Physics
Computational Drug Discovery Methods
article

Are we there yet? Adventures on a road trip through machine learning as a computational chemist

Heather Janine Kulik
article en

Abstract

Over the past two decades, the integration of machine learning (ML) into theoretical and computational chemistry has transformed the scale and scope of discovery that is possible on a computer. In this Perspective, I share my personal journey from early density functional theory method development for small transition metal complexes to the building of automated workflows and ML models for catalysis, redox chemistry, and materials design. I will describe my unlikely path toward machine learning starting from minimal models of catalysts and the use of structural databases to gain data-driven insights. I will then describe our experiences in training machine learning models for discovery, including active learning and descriptor-based approaches that enabled data-driven exploration despite limited experimental reference data for open-shell transition metal complexes. As an example of overcoming these limitations, I will describe our more recent efforts that culminated in experimental validation of our computational predictions. Along the way, challenges in data curation, DFT method sensitivity, and synthetic realism have shaped the trajectory of the field. I conclude with reflections on the rapid rise of generative AI, agentic workflows, and the enduring need to ask questions that truly advance molecular discovery.

APL Computational PhysicsVol. 1(2)
Massachusetts Institute of Technology (US)
Openalex Percentile: Top 71%
Computational Drug Discovery Methods
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Are we there yet? Adventures on a road trip through machine learning as a computational chemist — Heather Janine Kulik · APL Computational Physics (2025) | TGRS Research Map | TGRS