Obtaining RNA control sample and prospects of its application for diagnostics of yellow fever by the LAMP method

The aim of the study was to create a control RNA sample for yellow fever virus (YFV) diagnostics using the LAMP method. Two control samples were obtained: recombinant plasmid DNA (pCR2.1-YFV-K+) and mRNA (RNA-YFV-K+). During the assessment of the analytical sensitivity by the LAMP method, it was found that both samples demonstrated a comparable detection limit of 104 copies/ml, which allows for effective detection of the viral genetic material in the first days of disease symptoms. A study of the sample stability showed that at a temperature of -15 to -25 °C, both samples retain their functionality even after tenfold defrosting/freezing. At a temperature of 2 to 8 °C, the samples are determined as positive for 7 days of storage. However, stability decreases at room temperature: for pCR2.1-YFV-K+ it remains up to 72 hours, and for RNA-YFV-K+ — up to 48 hours. To ensure stability, samples should be stored at low temperatures (-15 to -25°C or 2 to 8°C). Based on the results, RNA-YFV-K+ can be used as a control for analytical sensitivity and correctness of the reverse transcription reaction followed by amplification by the LAMP method, which is important for the detection of RNA-containing yellow fever virus.

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Publication Details

Journal
Bulletin of NSAU (Novosibirsk State Agrarian University)
Published
2025-10-08
DOI
https://doi.org/10.31677/2072-6724-2025-76-3-261-268
Primary Topic
Biosensors and Analytical Detection
Type
article
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article

Obtaining RNA control sample and prospects of its application for diagnostics of yellow fever by the LAMP method

E. V. Chub, M. Yu. Kartashov, E. I. Krivosheina, K. R. Belichenko
Bulletin of NSAU (Novosibirsk State Agrarian University)
Biosensors and Analytical Detection
article

Obtaining RNA control sample and prospects of its application for diagnostics of yellow fever by the LAMP method

E. V. Chub, M. Yu. Kartashov, E. I. Krivosheina, K. R. Belichenko
article en

Abstract

The aim of the study was to create a control RNA sample for yellow fever virus (YFV) diagnostics using the LAMP method. Two control samples were obtained: recombinant plasmid DNA (pCR2.1-YFV-K+) and mRNA (RNA-YFV-K+). During the assessment of the analytical sensitivity by the LAMP method, it was found that both samples demonstrated a comparable detection limit of 104 copies/ml, which allows for effective detection of the viral genetic material in the first days of disease symptoms. A study of the sample stability showed that at a temperature of -15 to -25 °C, both samples retain their functionality even after tenfold defrosting/freezing. At a temperature of 2 to 8 °C, the samples are determined as positive for 7 days of storage. However, stability decreases at room temperature: for pCR2.1-YFV-K+ it remains up to 72 hours, and for RNA-YFV-K+ — up to 48 hours. To ensure stability, samples should be stored at low temperatures (-15 to -25°C or 2 to 8°C). Based on the results, RNA-YFV-K+ can be used as a control for analytical sensitivity and correctness of the reverse transcription reaction followed by amplification by the LAMP method, which is important for the detection of RNA-containing yellow fever virus.

Bulletin of NSAU (Novosibirsk State Agrarian University)(3)
State Research Center of Virology and Biotechnology VECTOR (RU)
Openalex Percentile: Top 73%
Biosensors and Analytical Detection
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