Cyclo-Stationary Distributions of mRNA and Protein Counts for Random Cell Division Times

There is a long history of using experimental and computational approaches to study noise in single-cell levels of mRNA and proteins. The noise originates from myriad factors: intrinsic processes of gene expression, partitioning errors during division, and extrinsic effects, such as random cell-cycle times. Although theoretical methods are well developed to analytically understand the statistics of copy numbers for fixed or Erlang distributed cell cycle times, the general problem of random division times is still open. For any random (but uncorrelated) division time distribution, we present a method to address this challenging problem and obtain exact series representations of the copy number distributions in the cyclo-stationary state. We provide explicit cell age-specific and age-averaged results, and analyze the relative contribution to noise from intrinsic and extrinsic sources. Our analytical approach will aid the analysis of single-cell expression data and help in disentangling the impact of variability in division times.

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Publication Details

Journal
PRX Life
Published
2025-09-12
DOI
https://doi.org/10.1103/ysj3-gkrr
Citations
1
Primary Topic
Gene Regulatory Network Analysis
Type
article
Field-Weighted Citation Impact
0.81
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article

Cyclo-Stationary Distributions of mRNA and Protein Counts for Random Cell Division Times

Abhyudai Singh, Ashok Prasad, Syed Yunus Ali, Dibyendu Das et al.
1 citations
PRX Life
Gene Regulatory Network Analysis
0.81
article

Cyclo-Stationary Distributions of mRNA and Protein Counts for Random Cell Division Times

Abhyudai Singh, Ashok Prasad, Syed Yunus Ali, Dibyendu Das, Amarnath Saran
article en
1 citations

Abstract

There is a long history of using experimental and computational approaches to study noise in single-cell levels of mRNA and proteins. The noise originates from myriad factors: intrinsic processes of gene expression, partitioning errors during division, and extrinsic effects, such as random cell-cycle times. Although theoretical methods are well developed to analytically understand the statistics of copy numbers for fixed or Erlang distributed cell cycle times, the general problem of random division times is still open. For any random (but uncorrelated) division time distribution, we present a method to address this challenging problem and obtain exact series representations of the copy number distributions in the cyclo-stationary state. We provide explicit cell age-specific and age-averaged results, and analyze the relative contribution to noise from intrinsic and extrinsic sources. Our analytical approach will aid the analysis of single-cell expression data and help in disentangling the impact of variability in division times.

PRX LifeVol. 3(4)
Indian Institute of Technology Bombay (IN), Max Planck Institute for the Physics of Complex Systems (DE), University of Delaware (US), Colorado State University (US)
Openalex Percentile: Top 23%
Gene Regulatory Network Analysis
0.81
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