<i>In Silico</i> Insights into Marine Natural Products as AChE and BChE Inhibitors

Background: Alzheimer’s Disease (AD), a progressive neurodegenerative disorder, remains a significant global health challenge. Aim: Acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) inhibitors are crucial in managing the symptoms of AD, and exploring new, potent inhibitors is an ongoing area of research. Methods: This study investigates the therapeutic potential of marine-derived natural products as AChE and BChE inhibitors through a detailed in silico approach. A total of 675 compounds from the COCONUT Natural Product Database were screened, with compounds CNP0200466, CNP0325153, and CNP0017810 identified as top candidates for AChE inhibition, and compounds CNP0310051.1 and CNP0313638 identified for BChE inhibition. Result: The docking analysis revealed that these compounds exhibited significantly higher binding affinities compared to the standard drugs, Galantamine and Rivastigmine. For AChE (PDB: 4EY7), Galantamine showed a binding score of -9.6 kcal/mol, while compounds CNP0200466, CNP0325153, and CNP0017810 demonstrated stronger affinities of -12.6, -11.5, and -10.8 kcal/mol, respectively. Similarly, for BChE (PDB: 5DYW), Rivastigmine showed a binding score of -7.2 kcal/mol, while compounds CNP0310051.1 and CNP0313638 exhibited superior affinities of -11.0 and -10.9 kcal/mol, respectively. Pharmacokinetic evaluation using SwissADME confirmed that all compounds exhibited high gastrointestinal absorption, blood-brain barrier permeability, and no P-glycoprotein interaction, suggesting their potential for efficient CNS targeting. ADMET analysis revealed favorable renal clearance, non-hepatotoxic profiles, and no significant AMES toxicity. These results indicate that the marine-derived compounds identified in this study possess both high efficacy and favorable safety profiles. Conclusion: In conclusion, the promising docking results, coupled with favorable pharmacokinetic and toxicological properties, make these marine-derived compounds strong candidates for further preclinical and clinical studies. Major Findings: The findings highlight the potential for these compounds to serve as novel therapeutic agents for Alzheimer’s disease, paving the way for more effective treatments for this devastating disorder.

Authors

Institutions

Publication Details

Journal
Journal of Natural Remedies
Published
2025-09-30
DOI
https://doi.org/10.18311/jnr/2025/48378
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

In Silico Insights into Marine Natural Products as AChE and BChE Inhibitors

Premal H. Patel, Pragnesh B Parmar
Journal of Natural Remedies
Computational Drug Discovery Methods
article

In Silico Insights into Marine Natural Products as AChE and BChE Inhibitors

Premal H. Patel, Pragnesh B Parmar
article en

Abstract

Background: Alzheimer’s Disease (AD), a progressive neurodegenerative disorder, remains a significant global health challenge. Aim: Acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) inhibitors are crucial in managing the symptoms of AD, and exploring new, potent inhibitors is an ongoing area of research. Methods: This study investigates the therapeutic potential of marine-derived natural products as AChE and BChE inhibitors through a detailed in silico approach. A total of 675 compounds from the COCONUT Natural Product Database were screened, with compounds CNP0200466, CNP0325153, and CNP0017810 identified as top candidates for AChE inhibition, and compounds CNP0310051.1 and CNP0313638 identified for BChE inhibition. Result: The docking analysis revealed that these compounds exhibited significantly higher binding affinities compared to the standard drugs, Galantamine and Rivastigmine. For AChE (PDB: 4EY7), Galantamine showed a binding score of -9.6 kcal/mol, while compounds CNP0200466, CNP0325153, and CNP0017810 demonstrated stronger affinities of -12.6, -11.5, and -10.8 kcal/mol, respectively. Similarly, for BChE (PDB: 5DYW), Rivastigmine showed a binding score of -7.2 kcal/mol, while compounds CNP0310051.1 and CNP0313638 exhibited superior affinities of -11.0 and -10.9 kcal/mol, respectively. Pharmacokinetic evaluation using SwissADME confirmed that all compounds exhibited high gastrointestinal absorption, blood-brain barrier permeability, and no P-glycoprotein interaction, suggesting their potential for efficient CNS targeting. ADMET analysis revealed favorable renal clearance, non-hepatotoxic profiles, and no significant AMES toxicity. These results indicate that the marine-derived compounds identified in this study possess both high efficacy and favorable safety profiles. Conclusion: In conclusion, the promising docking results, coupled with favorable pharmacokinetic and toxicological properties, make these marine-derived compounds strong candidates for further preclinical and clinical studies. Major Findings: The findings highlight the potential for these compounds to serve as novel therapeutic agents for Alzheimer’s disease, paving the way for more effective treatments for this devastating disorder.

Journal of Natural Remedies
Parul University (IN)
Openalex Percentile: Top 71%
Computational Drug Discovery Methods
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.