Guide to dynamic OCT data analysis

Dynamic optical coherence tomography (DOCT) enhances conventional OCT by providing specific information related to flow dynamics, cell motility, and organelle metabolic activity. These biological phenomena can be detected with varying sensitivity depending on the OCT architecture parameters, including wavelength, numerical aperture, and implementation method (time domain or Fourier domain). Despite its potential, the field lacks standardization as various research groups have independently developed algorithms for specific applications. In this paper, we compare four widely used DOCT algorithms, each employing a distinct analytical approach: power spectral density moment analysis, frequency band visualization, logarithmic intensity variation evaluation, and motility-based analysis. These algorithms were originally optimized for different OCT technologies (full-field OCT, microscopic OCT, swept-source OCT, and spectral domain OCT), which vary in temporal and spatial resolution as well as susceptibility to motion artifacts. To conduct a fair evaluation, we perform comprehensive cross-wise comparisons using datasets acquired from each of these setups. Our findings reveal that each method exhibits unique advantages in specific imaging environments, thereby providing valuable guidance for algorithm selection based on particular application requirements.