Photosynthetic electron, carbon, and oxygen fluxes within a mosaic of Fe limitation in the California Current upwelling system

Abstract. We compare primary productivity estimates based on different photosynthetic “currencies” (electrons, O2, and carbon) measured in the dynamic coastal upwelling waters of the California Current. Fast repetition rate fluorometry and O2/N2′ measurements were used to collect high-resolution underway estimates of photosynthetic electron transport rates and net community productivity, respectively, alongside on-station 14C uptake experiments to measure gross carbon fixation rates. Our survey captured two upwelling filaments at Cape Blanco and Cape Mendocino with distinct biogeochemical signatures and iron availabilities, enabling us to examine photosynthetic processes along a natural iron gradient. Significant differences in photophysiology, cell sizes, Si:NO3- draw-down ratios, and molecular markers of Fe stress indicated that phytoplankton assemblages near Cape Mendocino were Fe stressed, while those near Cape Blanco were Fe replete. Upwelling of O2-poor deep water to the surface complicated O2-based net community productivity estimates, but we were able to correct for these vertical mixing effects using continuous [N2O] surface measurements and depth-profiles of ∂[O2]∂[N2O]. Vertical mixing corrections were strongly correlated to sea surface temperature, which serves as an N2O-independent proxy for upwelling. All three productivity estimates reflected trends in Fe-stress physiology, indicating greater productivity near Cape Blanco compared to Cape Mendocino. For all phytoplankton assemblages, carbon fixation varied as a hyperbolic function of photosynthetic electron transport rates, but the derived parameters of this relationship were variable and significantly correlated with physiological indicators of Fe stress (σPSII, Fv/Fm, Si : NO3-, and diatom-specific PSI gene expression), suggesting that iron availability influenced the coupling between photosynthetic electron transport and carbon fixation. Net community productivity showed strong coherence with daily integrated photosynthetic electron transport rates across the entire cruise track, with no apparent relationship with Fe stress. This result suggests that fluorescence-based estimates of gross photochemistry are still a good indicator for bulk primary productivity, even if Fe limitation influences the stoichiometric relationship between different productivity currencies.