Contribution to the mycobiota of Türkiye: New macrofungal records from Koramaz Valley revealed by molecular methods

Abstract This study aimed to document and identify the macrofungal diversity of Koramaz Valley (Kayseri, Türkiye) by integrating traditional morphological approaches with molecular DNA barcoding, specifically targeting the ITS gene region. While approximately 144,000 fungal species have been described worldwide, the actual number is estimated at 2.2 to 3.8 million, indicating vast undiscovered diversity—especially in regions such as Türkiye, where the mycobiota remains incompletely cataloged. The Koramaz Valley, noted for its unique ecosystems and presence on the UNESCO World Heritage Tentative List, had not previously been the subject of molecular-based macrofungal investigations. Fieldwork involved the systematic collection and photographic documentation of macrofungal specimens, with detailed recording of ecological and morphological features. DNA was extracted from dried samples, the ITS region amplified and sequenced, and the resulting data compared to reference sequences using BLAST and phylogenetic analyses (Maximum Likelihood in MEGA). Morphological and molecular data were integrated to achieve reliable species identification. As a result, four macrofungal species—Coprinellus saccharinus (Romagn.) P. Roux, Guy García & Dumas, Coprinellus truncorum (Scop.) Redhead, Vilgalys & Moncalvo, Fomes inzengae (Ces. & De Not.) Cooke and Lepista ricekii Bon—were recorded for the first time in Türkiye based on molecular evidence. Phylogenetic trees constructed for each genus revealed strong bootstrap support for the identification and placement of the studied specimens, with some samples demonstrating close but distinct relationships to reference taxa. These findings highlight the effectiveness of the ITS region in resolving species-level relationships and underscore the need for molecular approaches in fungal taxonomy. In conclusion, the study significantly expands the known macrofungal diversity of Koramaz Valley and Türkiye. It demonstrates the indispensable role of integrating molecular and morphological methods in the discovery, documentation, and conservation of regional fungal biodiversity, and indicates the potential for novel species in the area.

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Publication Details

Journal
Biological Diversity and Conservation
Published
2025-10-02
DOI
https://doi.org/10.46309/biodicon.2025.1732263
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
Field-Weighted Citation Impact
0.00

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article

Contribution to the mycobiota of Türkiye: New macrofungal records from Koramaz Valley revealed by molecular methods

Mehmet Gökhan Halıcı, Mithat Güllü
Biological Diversity and Conservation
Mycorrhizal Fungi and Plant Interactions
article

Contribution to the mycobiota of Türkiye: New macrofungal records from Koramaz Valley revealed by molecular methods

Mehmet Gökhan Halıcı, Mithat Güllü
article en

Abstract

Abstract This study aimed to document and identify the macrofungal diversity of Koramaz Valley (Kayseri, Türkiye) by integrating traditional morphological approaches with molecular DNA barcoding, specifically targeting the ITS gene region. While approximately 144,000 fungal species have been described worldwide, the actual number is estimated at 2.2 to 3.8 million, indicating vast undiscovered diversity—especially in regions such as Türkiye, where the mycobiota remains incompletely cataloged. The Koramaz Valley, noted for its unique ecosystems and presence on the UNESCO World Heritage Tentative List, had not previously been the subject of molecular-based macrofungal investigations. Fieldwork involved the systematic collection and photographic documentation of macrofungal specimens, with detailed recording of ecological and morphological features. DNA was extracted from dried samples, the ITS region amplified and sequenced, and the resulting data compared to reference sequences using BLAST and phylogenetic analyses (Maximum Likelihood in MEGA). Morphological and molecular data were integrated to achieve reliable species identification. As a result, four macrofungal species—Coprinellus saccharinus (Romagn.) P. Roux, Guy García & Dumas, Coprinellus truncorum (Scop.) Redhead, Vilgalys & Moncalvo, Fomes inzengae (Ces. & De Not.) Cooke and Lepista ricekii Bon—were recorded for the first time in Türkiye based on molecular evidence. Phylogenetic trees constructed for each genus revealed strong bootstrap support for the identification and placement of the studied specimens, with some samples demonstrating close but distinct relationships to reference taxa. These findings highlight the effectiveness of the ITS region in resolving species-level relationships and underscore the need for molecular approaches in fungal taxonomy. In conclusion, the study significantly expands the known macrofungal diversity of Koramaz Valley and Türkiye. It demonstrates the indispensable role of integrating molecular and morphological methods in the discovery, documentation, and conservation of regional fungal biodiversity, and indicates the potential for novel species in the area.

Biological Diversity and ConservationVol. 18(3)
Erciyes University (TR)
Erciyes Üniversitesi
Openalex Percentile: Top 80%
Mycorrhizal Fungi and Plant Interactions
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