Text-Driven Weakly Supervised OCT Lesion Segmentation with Structural Guidance

Accurate segmentation of Optical Coherence Tomography (OCT) images is crucial for diagnosing and monitoring retinal diseases. However, the labor-intensive nature of pixel-level annotation limits the scalability of supervised learning for large datasets. Weakly Supervised Semantic Segmentation (WSSS) offers a promising alternative by using weaker forms of supervision, such as image-level labels, to reduce the annotation burden. Despite its advantages, weak supervision inherently carries limited information. We propose a novel WSSS framework with only image-level labels for OCT lesion segmentation that integrates structural and text-driven guidance to produce high-quality, pixel-level pseudo labels. The framework employs two visual processing modules: one that processes the original OCT images and another that operates on layer segmentations augmented with anomalous signals, enabling the model to associate lesions with their corresponding anatomical layers. Complementing these visual cues, we leverage large-scale pretrained models to provide two forms of textual guidance: label-derived descriptions that encode local semantics, and domain-agnostic synthetic descriptions that, although expressed in natural image terms, capture spatial and relational semantics useful for generating globally consistent representations. By fusing these visual and textual features in a multi-modal framework, our method aligns semantic meaning with structural relevance, thereby improving lesion localization and segmentation performance. Experiments on three OCT datasets demonstrate state-of-the-art results, highlighting its potential to advance diagnostic accuracy and efficiency in medical imaging. The code and pretrained models are publicly available at https://github.com/YangjiaqiDig/WSSS-AGM/tree/master/structure_guided.

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Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2025-01-01
DOI
https://doi.org/10.1109/jbhi.2025.3616290
Primary Topic
Retinal Imaging and Analysis
Type
article
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article

Text-Driven Weakly Supervised OCT Lesion Segmentation with Structural Guidance

Nitish Mehta, Xiao Hu, Chao Chen, Jiaqi Yang et al.
IEEE Journal of Biomedical and Health Informatics
Retinal Imaging and Analysis
article

Text-Driven Weakly Supervised OCT Lesion Segmentation with Structural Guidance

Nitish Mehta, Xiao Hu, Chao Chen, Jiaqi Yang, Chia-Ling Tsai
article en

Abstract

Accurate segmentation of Optical Coherence Tomography (OCT) images is crucial for diagnosing and monitoring retinal diseases. However, the labor-intensive nature of pixel-level annotation limits the scalability of supervised learning for large datasets. Weakly Supervised Semantic Segmentation (WSSS) offers a promising alternative by using weaker forms of supervision, such as image-level labels, to reduce the annotation burden. Despite its advantages, weak supervision inherently carries limited information. We propose a novel WSSS framework with only image-level labels for OCT lesion segmentation that integrates structural and text-driven guidance to produce high-quality, pixel-level pseudo labels. The framework employs two visual processing modules: one that processes the original OCT images and another that operates on layer segmentations augmented with anomalous signals, enabling the model to associate lesions with their corresponding anatomical layers. Complementing these visual cues, we leverage large-scale pretrained models to provide two forms of textual guidance: label-derived descriptions that encode local semantics, and domain-agnostic synthetic descriptions that, although expressed in natural image terms, capture spatial and relational semantics useful for generating globally consistent representations. By fusing these visual and textual features in a multi-modal framework, our method aligns semantic meaning with structural relevance, thereby improving lesion localization and segmentation performance. Experiments on three OCT datasets demonstrate state-of-the-art results, highlighting its potential to advance diagnostic accuracy and efficiency in medical imaging. The code and pretrained models are publicly available at https://github.com/YangjiaqiDig/WSSS-AGM/tree/master/structure_guided.

IEEE Journal of Biomedical and Health InformaticsVol. PP
The Graduate Center, CUNY (US), NYU Langone Health (US), Massachusetts General Hospital (US), Stony Brook Medicine (US), Stony Brook University (US)
Openalex Percentile: Top 59%
Retinal Imaging and Analysis
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