Revealing Phenotypic Differentiation in Ochetobius elongatus from the Middle Yangtze River Through Geometric Morphometrics

<i>Ochetobius elongatus</i>, a critically endangered (CR) fish species of the Yangtze River Basin in China, has experienced a severe decline in its wild population. Understanding its mechanisms of phenotypic variation is essential for developing effective conservation and restoration strategies. Using geometric morphometrics based on 14 landmarks, we examined the phenotypic difference among five populations from the mainstem, the tributary, and the river-connected lakes of the middle Yangtze River. The results showed that significant phenotypic divergence was detected between river and lake populations. River individuals exhibited a more elongated body, smaller head, inferior mouth position, larger operculum, and narrower caudal peduncle, whereas lake individuals showed a deeper body, and anterior shift in the origin of pelvic fin. The first canonical variable effectively distinguished river and lake populations, with the accuracy of both original and cross-validation classification exceeding 90%, indicating that habitat heterogeneity was the primary driver of phenotypic differentiation. No significant correlation was found between morphological distance and geographical distance. Water temperature, flow velocity, water depth, and food abundance significantly influenced phenotypic variation, but their individual effects were limited, which suggested that environmental shaping of morphology depended more on synergistic effects. Our findings provide important insights into the adaptive evolution of this critically endangered species and offer a scientific basis for conservation efforts.