Bitopic A<sub>3</sub> Adenosine Receptor Molecular Probes: Positive Allosteric Modulation and Noncanonical Activation

1<i>H</i>-Imidazo[4,5-<i>c</i>]quinolin-4-amines are lipid-facing, positive allosteric modulators (PAMs) of the G<sub>i</sub>-coupled A<sub>3</sub> adenosine receptor (A<sub>3</sub>AR). Elongated amino-alkyl chains anchor these bitopic PAMs secondarily to anionic phospholipids in the membrane's inner leaflet. Varied terminal functionalities and introduced reporter groups, as well as <i>N</i>1-alkylation on the core heterocycle, substantially enhanced human A<sub>3</sub>AR agonist (Cl-IB-MECA) potency and efficacy in [<sup>35</sup>S]GTPγS binding and revealed ago-PAM activity. Docking calculations predicted <i>N</i>1-benzylation to reduce undesired orthosteric site binding. Fluorophores, biotin, click moieties, chemically reactive, and photouncaging groups were included. Compound <b>38</b> (MRS8435, 9-methylenes, 0.1-10 μM) achieved ∼300% agonist <i>E</i><sub>max</sub> without ago-PAM activity. 4-Methyl <b>36</b> and 4-iodo <b>46</b> substitution of <i>N</i>1-benzyl increased Cl-IB-MECA potency by 14.7- and 30.5-fold, respectively. 9-Methylene <i>N</i>1-benzyl derivatives <b>35</b> and <b>42</b> achieved high ago-PAM efficacy (∼77% Cl-IB-MECA <i>E</i><sub>max</sub>). Molecular dynamics simulations detected stable electrostatic phospholipid interactions while maintaining A<sub>3</sub>AR allosteric binding. Thus, we rationally expanded SAR of bitopic A<sub>3</sub>AR PAMs, including molecular probes.

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Publication Details

Journal
Journal of Medicinal Chemistry
Published
2025-09-30
DOI
https://doi.org/10.1021/acs.jmedchem.5c01985
Citations
1
Primary Topic
Receptor Mechanisms and Signaling
Type
article
Field-Weighted Citation Impact
0.81
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article

Bitopic A3 Adenosine Receptor Molecular Probes: Positive Allosteric Modulation and Noncanonical Activation

Siva Hariprasad Kurma, Francisco Ciruela, Marc López‐Cano, Matteo Pavan et al.
1 citations
Journal of Medicinal Chemistry
Receptor Mechanisms and Signaling
0.81
article

Bitopic A3 Adenosine Receptor Molecular Probes: Positive Allosteric Modulation and Noncanonical Activation

Siva Hariprasad Kurma, Francisco Ciruela, Marc López‐Cano, Matteo Pavan, Balaram Pradhan, John A. Auchampach, Tina C. Wan, Kenneth A. Jacobson, Zhan-Guo Gao
article en
1 citations

Abstract

1<i>H</i>-Imidazo[4,5-<i>c</i>]quinolin-4-amines are lipid-facing, positive allosteric modulators (PAMs) of the G<sub>i</sub>-coupled A<sub>3</sub> adenosine receptor (A<sub>3</sub>AR). Elongated amino-alkyl chains anchor these bitopic PAMs secondarily to anionic phospholipids in the membrane's inner leaflet. Varied terminal functionalities and introduced reporter groups, as well as <i>N</i>1-alkylation on the core heterocycle, substantially enhanced human A<sub>3</sub>AR agonist (Cl-IB-MECA) potency and efficacy in [<sup>35</sup>S]GTPγS binding and revealed ago-PAM activity. Docking calculations predicted <i>N</i>1-benzylation to reduce undesired orthosteric site binding. Fluorophores, biotin, click moieties, chemically reactive, and photouncaging groups were included. Compound <b>38</b> (MRS8435, 9-methylenes, 0.1-10 μM) achieved ∼300% agonist <i>E</i><sub>max</sub> without ago-PAM activity. 4-Methyl <b>36</b> and 4-iodo <b>46</b> substitution of <i>N</i>1-benzyl increased Cl-IB-MECA potency by 14.7- and 30.5-fold, respectively. 9-Methylene <i>N</i>1-benzyl derivatives <b>35</b> and <b>42</b> achieved high ago-PAM efficacy (∼77% Cl-IB-MECA <i>E</i><sub>max</sub>). Molecular dynamics simulations detected stable electrostatic phospholipid interactions while maintaining A<sub>3</sub>AR allosteric binding. Thus, we rationally expanded SAR of bitopic A<sub>3</sub>AR PAMs, including molecular probes.

Journal of Medicinal ChemistryVol. 68(19)
National Institutes of Health (US), Neurosciences Institute (US), Medical College of Wisconsin (US), Bellvitge University Hospital (ES), Institut d'Investigació Biomédica de Bellvitge (ES), National Institute of Diabetes and Digestive and Kidney Diseases (US), Society of Environmental Toxicology and Chemistry (US), Cypress Pointe Pain Management (US), Institute of Pharmacology (CZ), Universitat de Barcelona (ES)
Openalex Percentile: Top 23%
Receptor Mechanisms and Signaling
0.81
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