Using paleometry to address biogenicity in paleobiology

Biogenicity assessments in paleobiology encompass a broad range of criteria, arguments, and methodological approaches for evaluating the origin of fossil objects and purported biological materials. Amid this uncertainty, paleometry emerges as a critical tool for deepening and refining our understanding of biogenicity. This study aims to systematize procedures observed across recurring patterns in the literature, to critically examine the type of data acquired, and to expand the application of high-resolution analytical techniques. Rather than debating optimal criteria, we propose a direct and structured framework for biogenicity assessment, outlining standardized steps, choosing the most powerful techniques for solving specific issues, result interpretation, and scientific discussion. Biogenicity-related studies are categorized into three major groups: (1) dubiofossils, including microfossil-, ichnofossil-, and biomineral-like forms; (2) fossilization processes involving microbial mediation; and (3) potential biominerals associated with skeletal metazoans. Despite their differences, these categories share a fundamental reliance on reconstructing diagenetic history, a prerequisite for any meaningful biogenicity inference. In this context, paleometry plays a central role across all stages of investigation. Our analysis highlights the widespread use of high-resolution, non-destructive techniques such as optical microscopy (OM), scanning electron microscopy with energy-dispersive spectroscopy (SEM-EDS), micro-Raman spectroscopy (µ-RS), and Fourier-transform infrared spectroscopy (FT-IR), largely applied for their minimal sample preparation and versatile micrometer-scale capabilities. We also propose the utilization of other techniques, still underexplored in biogenicity studies. Furthermore, the temporal distribution of case studies reveals a concentration of research on geologic intervals associated with key evolutionary and environmental transitions, which we argue the distribution of biogenicity studies in such periods. The protocols proposed herein offer a flexible and reproducible methodological pathway. By guiding researchers from analytical technique selection to data interpretation, this framework aims to facilitate future investigations and foster more coherent discussions around the biogenicity of paleobiological materials.

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Publication Details

Journal
Frontiers in Ecology and Evolution
Published
2025-09-29
DOI
https://doi.org/10.3389/fevo.2025.1646756
Primary Topic
Geology and Paleoclimatology Research
Type
article
Field-Weighted Citation Impact
0.00

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Using paleometry to address biogenicity in paleobiology

Gabriel Ladeira Osés, Flávia Callefo, Alisson Klayton Martins, João Pedro Saldanha
Frontiers in Ecology and Evolution
Geology and Paleoclimatology Research
article

Using paleometry to address biogenicity in paleobiology

Gabriel Ladeira Osés, Flávia Callefo, Alisson Klayton Martins, João Pedro Saldanha
article en

Abstract

Biogenicity assessments in paleobiology encompass a broad range of criteria, arguments, and methodological approaches for evaluating the origin of fossil objects and purported biological materials. Amid this uncertainty, paleometry emerges as a critical tool for deepening and refining our understanding of biogenicity. This study aims to systematize procedures observed across recurring patterns in the literature, to critically examine the type of data acquired, and to expand the application of high-resolution analytical techniques. Rather than debating optimal criteria, we propose a direct and structured framework for biogenicity assessment, outlining standardized steps, choosing the most powerful techniques for solving specific issues, result interpretation, and scientific discussion. Biogenicity-related studies are categorized into three major groups: (1) dubiofossils, including microfossil-, ichnofossil-, and biomineral-like forms; (2) fossilization processes involving microbial mediation; and (3) potential biominerals associated with skeletal metazoans. Despite their differences, these categories share a fundamental reliance on reconstructing diagenetic history, a prerequisite for any meaningful biogenicity inference. In this context, paleometry plays a central role across all stages of investigation. Our analysis highlights the widespread use of high-resolution, non-destructive techniques such as optical microscopy (OM), scanning electron microscopy with energy-dispersive spectroscopy (SEM-EDS), micro-Raman spectroscopy (µ-RS), and Fourier-transform infrared spectroscopy (FT-IR), largely applied for their minimal sample preparation and versatile micrometer-scale capabilities. We also propose the utilization of other techniques, still underexplored in biogenicity studies. Furthermore, the temporal distribution of case studies reveals a concentration of research on geologic intervals associated with key evolutionary and environmental transitions, which we argue the distribution of biogenicity studies in such periods. The protocols proposed herein offer a flexible and reproducible methodological pathway. By guiding researchers from analytical technique selection to data interpretation, this framework aims to facilitate future investigations and foster more coherent discussions around the biogenicity of paleobiological materials.

Frontiers in Ecology and EvolutionVol. 13
Universidade Federal do Rio Grande do Sul (BR), Universidade de São Paulo (BR), Laboratório Nacional de Ciência e Tecnologia do Bioetanol (BR), Brazilian Synchrotron Light Laboratory (BR), Instituto de Geociencias (ES)
Fundação de Amparo à Pesquisa do Estado de São Paulo, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior
Openalex Percentile: Top 68%
Geology and Paleoclimatology Research
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