Towards population scale testis volume segmentation in DIXON MRI

Testis size is known to be one of the main predictors of male fertility, usually assessed in clinical workup via palpation or imaging. Despite its potential, population-level evaluation of testicular volume using imaging remains underexplored. Previous studies, limited by small and biased datasets, have demonstrated the feasibility of machine learning for testis volume segmentation. This paper presents an evaluation of segmentation methods for testicular volume using Magnetic Resonance Imaging data from the UKBiobank. The best model achieves a median dice score of 0.89, compared to median dice score of 0.85 for human interrater reliability on the same dataset, enabling large-scale annotation on a population scale for the first time. Our overall aim is to provide a trained model, comparative baseline methods, and annotated training data to enhance accessibility and reproducibility in testis MRI segmentation research.

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Publication Details

Journal
Computers in Biology and Medicine
Published
2025-09-29
DOI
https://doi.org/10.1016/j.compbiomed.2025.111139
Primary Topic
Advanced Neural Network Applications
Type
article
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article

Towards population scale testis volume segmentation in DIXON MRI

Benjamin Risse, Lynn Ogoniak, Wolfgang Roll, Jacqueline Kockwelp et al.
Computers in Biology and Medicine
Advanced Neural Network Applications
article

Towards population scale testis volume segmentation in DIXON MRI

Benjamin Risse, Lynn Ogoniak, Wolfgang Roll, Jacqueline Kockwelp, Jan Ernsting, Tim Hahn, Alexander S. Busch, Philipp Beeken
article en

Abstract

Testis size is known to be one of the main predictors of male fertility, usually assessed in clinical workup via palpation or imaging. Despite its potential, population-level evaluation of testicular volume using imaging remains underexplored. Previous studies, limited by small and biased datasets, have demonstrated the feasibility of machine learning for testis volume segmentation. This paper presents an evaluation of segmentation methods for testicular volume using Magnetic Resonance Imaging data from the UKBiobank. The best model achieves a median dice score of 0.89, compared to median dice score of 0.85 for human interrater reliability on the same dataset, enabling large-scale annotation on a population scale for the first time. Our overall aim is to provide a trained model, comparative baseline methods, and annotated training data to enhance accessibility and reproducibility in testis MRI segmentation research.

Computers in Biology and MedicineVol. 198(Pt A)
University of Münster (DE), University Hospital Münster (DE), FH Münster University of Applied Sciences (DE)
Openalex Percentile: Top 74%
Advanced Neural Network Applications
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Towards population scale testis volume segmentation in DIXON MRI — Benjamin Risse, Lynn Ogoniak, et al. · Computers in Biology and Medicine (2025) | TGRS Research Map | TGRS