HDA-SAMUNet: A Medical Image Segmentation Method Based on Vision Mamba UNet and MedSAM

Deep learning methods have been extensively explored for medical image segmentation. Although recent CNN--based and Transformer-based frameworks have advanced medical-image segmentation, they remain computationally burdensome and yield suboptimal boundary delineation, hindering their adoption in time-critical clinical workflows. We propose a novel medical image segmentation method to address these issues by integrating the Visual State Space model Vision Mamba UNet(VM-UNet) with the medical image foundation model MedSAM. First, we introduce a LD Block at the input stage and a LCC Block within the existing VM-UNet framework, forming a new sub-network named HDA-UNet (a Hybrid model combining Dense connectivity and Attention in VM-UNet). Then, we incorporate high-quality features extracted from MedSAM into the deep layers of the U-shaped network through dual parallel encoders, enhancing the representational capacity of the encoded features. Finally, the fused features are fed into a multi-scale decoder to generate accurate segmentation outputs, resulting in the complete architecture HDA-SAMUNet. We evaluate our method on several public datasets, including ISIC-2017 and ISIC2018. Empirical results show that HDA-SAMUNet surpasses VM-UNet by $0.89 \% \mathrm{mIoU}$, 0.55% DSC, and 0.26% Acc on ISIC2017, with similar gains on ISIC-2018, underscoring its potential to deliver more accurate and dependable medical-image segmentations in clinical practice.

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Publication Details

Published
2025-06-20
DOI
https://doi.org/10.1109/icecai66283.2025.11170677
Primary Topic
Brain Tumor Detection and Classification
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article
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article

HDA-SAMUNet: A Medical Image Segmentation Method Based on Vision Mamba UNet and MedSAM

Dong Yin, Muhammad Anwar‐ul‐Haq, Tao Sun, Wenhui Zhou
Brain Tumor Detection and Classification
article

HDA-SAMUNet: A Medical Image Segmentation Method Based on Vision Mamba UNet and MedSAM

Dong Yin, Muhammad Anwar‐ul‐Haq, Tao Sun, Wenhui Zhou
article en

Abstract

Deep learning methods have been extensively explored for medical image segmentation. Although recent CNN--based and Transformer-based frameworks have advanced medical-image segmentation, they remain computationally burdensome and yield suboptimal boundary delineation, hindering their adoption in time-critical clinical workflows. We propose a novel medical image segmentation method to address these issues by integrating the Visual State Space model Vision Mamba UNet(VM-UNet) with the medical image foundation model MedSAM. First, we introduce a LD Block at the input stage and a LCC Block within the existing VM-UNet framework, forming a new sub-network named HDA-UNet (a Hybrid model combining Dense connectivity and Attention in VM-UNet). Then, we incorporate high-quality features extracted from MedSAM into the deep layers of the U-shaped network through dual parallel encoders, enhancing the representational capacity of the encoded features. Finally, the fused features are fed into a multi-scale decoder to generate accurate segmentation outputs, resulting in the complete architecture HDA-SAMUNet. We evaluate our method on several public datasets, including ISIC-2017 and ISIC2018. Empirical results show that HDA-SAMUNet surpasses VM-UNet by $0.89 \% \mathrm{mIoU}$, 0.55% DSC, and 0.26% Acc on ISIC2017, with similar gains on ISIC-2018, underscoring its potential to deliver more accurate and dependable medical-image segmentations in clinical practice.

University of Science and Technology of China (CN)
Openalex Percentile: Top 66%
Brain Tumor Detection and Classification
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