Cecal bacterial communities and lung immunity in layers fed omega-3 fatty acids or yeast bioactives under different space allowance

The poultry-rearing environment and diet can influence gut microbiota and immunity. However, the long-term effects of early-life nutritional interventions on gut heath in layers under various spacing allowances (SA) are not well understood. This study investigated how early-life dietary yeast bioactives (YB) or co-extruded full-fat flaxseed, a source of omega-3 fatty acids (N-3 FA), from placement to 16 weeks of age (woa) influenced the development of cecal microbiota and immune function in Lohmann LSL Lite pullets reared under different SA, with follow-up to 72 woa. The experiment involved 2,832 newly hatched chicks reared in an enriched cage system under high (HSA, 348 cm²/bird) or low (LSA, 284 cm²/bird) SA and fed either control diet (C), C + 3 % N-3 FA, or C + 0.05 % YB. Ceca were sampled at 4, 8, 16, 35, and 72 woa for bacterial plate counts, 16S rRNA sequencing, and short-chain fatty acid (SCFA) quantification. Lungs were analyzed for immune gene expression. At 4 and 16 woa, β-diversity (P = 0.01) revealed dissimilarity between the bacterial communities of birds under HSA and LSA groups. High Bacteroides abundances, propionic and iso-butyric acids concentrations were observed in LSA at both sampling points (P<0.05). At 16 woa, the highest and lowest n-butyrate concentrations were noted in N-3 FA- and control-fed birds, respectively (P < 0.05), regardless of SA. Barnesiellaceae positively correlated with n-valeric and acetic acid in N-3 FA-fed birds at 4 woa. In YB-fed pullets, Lactobacillaceae and Enterobacteriaceae showed a positive correlation with n-butyric acid. In the lungs, about 15 genes, including IL1β,IL2, and IL8, were differentially expressed depending on SA and diets (P<0.05). Early dietary YB or N-3 FA under different SA modulated cecal bacterial community diversity and structure, SCFA profiles, and enhanced lung immune responses in layer.