ECGtizer: An open-source, fully automated pipeline for digitization and signal recovery from paper electrocardiograms

Electrocardiograms (ECGs) are essential for diagnosing cardiac pathologies, yet traditional paper-based ECG storage poses significant challenges for automated analyses. Despite the growing interest in leveraging AI for ECG analysis, there remains a lack of accessible, fully automated tools for digitizing paper-based ECGs. Existing solutions are often incomplete, behind paywalls, or not suited for large-scale use. To address this gap, we present ECGtizer : an open-source, fully automated tool that enables high-fidelity digitization of paper ECGs, ensuring long-term preservation of clinical data and unlocking their potential for modern AI-driven analysis. ECGtizer employs automated lead detection, three different pixel-based signal extraction algorithms, and a deep learning-based signal reconstruction module. We evaluated ECGtizer on two datasets: a real-life cohort from the COVID-19 pandemic (JOCOVID) and a publicly available dataset (PTB-XL). Performance was compared with two existing methods: the fully automated ECGminer and the semi-automated PaperECG , which requires human intervention. The tools’ digitization performance was assessed in terms of signal recovery, the fidelity of clinically relevant feature measurement and downstream AI classification tasks on a third dataset (GENEREPOL). Results show that ECGtizer outperforms state-of-the-art methods, with its ECGtizer Frag algorithm delivering superior signal recovery performance. While PaperECG demonstrated better outcomes than ECGminer , it also requires human input. ECGtizer enhances the usability of historical ECG data and supports advanced AI-based diagnostic methods, making it a valuable addition to the field of AI in ECG analysis. • Introduced ECGtizer, an open source and fully automated tool to digitize paper ECGs. • ECGtizer outperforms current methods in signal recovery. • Tested on real-world and public datasets. • Supports advanced AI diagnostic methods. • Opens new research avenues by allowing the use of ECG historical data.

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Publication Details

Journal
Biomedical Signal Processing and Control
Published
2025-09-27
DOI
https://doi.org/10.1016/j.bspc.2025.108710
Primary Topic
ECG Monitoring and Analysis
Type
article
Field-Weighted Citation Impact
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article

ECGtizer: An open-source, fully automated pipeline for digitization and signal recovery from paper electrocardiograms

Federica Granese, Edi Prifti, Ahmad Fall, Joe‐Elie Salem et al.
Biomedical Signal Processing and Control
ECG Monitoring and Analysis
article

ECGtizer: An open-source, fully automated pipeline for digitization and signal recovery from paper electrocardiograms

Federica Granese, Edi Prifti, Ahmad Fall, Joe‐Elie Salem, Jean‐Daniel Zucker, S. Cohen, Alex Lence
article en

Abstract

Electrocardiograms (ECGs) are essential for diagnosing cardiac pathologies, yet traditional paper-based ECG storage poses significant challenges for automated analyses. Despite the growing interest in leveraging AI for ECG analysis, there remains a lack of accessible, fully automated tools for digitizing paper-based ECGs. Existing solutions are often incomplete, behind paywalls, or not suited for large-scale use. To address this gap, we present ECGtizer : an open-source, fully automated tool that enables high-fidelity digitization of paper ECGs, ensuring long-term preservation of clinical data and unlocking their potential for modern AI-driven analysis. ECGtizer employs automated lead detection, three different pixel-based signal extraction algorithms, and a deep learning-based signal reconstruction module. We evaluated ECGtizer on two datasets: a real-life cohort from the COVID-19 pandemic (JOCOVID) and a publicly available dataset (PTB-XL). Performance was compared with two existing methods: the fully automated ECGminer and the semi-automated PaperECG , which requires human intervention. The tools’ digitization performance was assessed in terms of signal recovery, the fidelity of clinically relevant feature measurement and downstream AI classification tasks on a third dataset (GENEREPOL). Results show that ECGtizer outperforms state-of-the-art methods, with its ECGtizer Frag algorithm delivering superior signal recovery performance. While PaperECG demonstrated better outcomes than ECGminer , it also requires human input. ECGtizer enhances the usability of historical ECG data and supports advanced AI-based diagnostic methods, making it a valuable addition to the field of AI in ECG analysis. • Introduced ECGtizer, an open source and fully automated tool to digitize paper ECGs. • ECGtizer outperforms current methods in signal recovery. • Tested on real-world and public datasets. • Supports advanced AI diagnostic methods. • Opens new research avenues by allowing the use of ECG historical data.

Biomedical Signal Processing and ControlVol. 112
Inserm (FR), Sorbonne Université (FR), Nutrition et obésité : approches systémiques (FR), Assistance Publique – Hôpitaux de Paris (FR), Pitié-Salpêtrière Hospital (FR), Unité de Modélisation Mathématique et Informatique des Systèmes Complexes (FR), Institut de Recherche pour le Développement (FR), Vanderbilt University Medical Center (US)
Openalex Percentile: Top 60%
ECG Monitoring and Analysis
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