auto-AUTO: A Python Layer for Automatically Running the AUTO-07p Continuation Software

auto-AUTO (or AUTO 2 ) is a Python package that acts as an intermediate layer between the user and AUTO-07p continuation software (Doedel et al., 2007) (AUTO from here on).auto-AUTO automates the running of AUTO by monitoring the continuation, while also keeping track of bifurcation points.The package can automatically continue along these branching points, and continue branching along further bifurcation points to attempt to construct full bifurcation trees.To achieve this in a reliable way, AUTO computations are managed by auto-AUTO by setting appropriate stopping conditions, such as meeting other branches, looping branches, and specified bifurcations.These stopping conditions supplement the usual AUTO bounds and ensure that branches of detected solutions are unique and well defined.

Authors

Institutions

Publication Details

Journal
The Journal of Open Source Software
Published
2025-09-27
DOI
https://doi.org/10.21105/joss.08079
Primary Topic
Ecosystem dynamics and resilience
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

auto-AUTO: A Python Layer for Automatically Running the AUTO-07p Continuation Software

Jonathan Demaeyer, Oisín Hamilton
The Journal of Open Source Software
Ecosystem dynamics and resilience
article

auto-AUTO: A Python Layer for Automatically Running the AUTO-07p Continuation Software

Jonathan Demaeyer, Oisín Hamilton
article en

Abstract

auto-AUTO (or AUTO 2 ) is a Python package that acts as an intermediate layer between the user and AUTO-07p continuation software (Doedel et al., 2007) (AUTO from here on).auto-AUTO automates the running of AUTO by monitoring the continuation, while also keeping track of bifurcation points.The package can automatically continue along these branching points, and continue branching along further bifurcation points to attempt to construct full bifurcation trees.To achieve this in a reliable way, AUTO computations are managed by auto-AUTO by setting appropriate stopping conditions, such as meeting other branches, looping branches, and specified bifurcations.These stopping conditions supplement the usual AUTO bounds and ensure that branches of detected solutions are unique and well defined.

The Journal of Open Source SoftwareVol. 10(113)
Royal Meteorological Institute of Belgium (BE), de Duve Institute (BE)
European Commission, Fédération Wallonie-Bruxelles, Fonds Spéciaux de Recherche
Openalex Percentile: Top 75%
Ecosystem dynamics and resilience
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.