AI-informed computational pathology classifier predicts outcomes across treatment modalities in muscle-invasive urothelial carcinoma
Urothelial carcinoma (UC) is one of the leading causes of cancer-related mortality, and effective, scalable biomarkers for treatment planning remain limited. We present UC-TIL, an artificial intelligence (AI)-based model that quantifies spatial patterns of tumor-infiltrating lymphocytes (TILs) from routine H&E-stained slides to predict survival and immunotherapy response. We analyzed 558 whole-slide images across three cohorts: TCGA (D<sub>0</sub>&<sub>1</sub>, N = 292), Emory (D<sub>2</sub>, N = 161), and TRRC2819 (D<sub>3</sub>, N = 105), spanning chemotherapy and immune checkpoint inhibitor (ICI) treatments. UC-TIL classification was associated with OS (HR = 2.11, 95 %CI:1.01-4.41, p = 0.011) and PFS (HR = 3.68, 95 %CI:1.07-12.65, p = 0.0012) in locally advanced disease (D<sub>1</sub> and D<sub>2</sub>), with consistent results in metastatic disease (D<sub>3</sub>) (HR = 1.73, 95 %CI:1.08-2.77, p = 0.043; PFS HR = 1.73, 95 %CI:1.07-2.81, p = 0.047). In the ICI-treated D<sub>3</sub> cohort, UC-TIL achieved AUC = 0.757 and identified non-responders with 91 % specificity. UC-TIL enables reliable risk stratification and treatment response prediction in both locally advanced and metastatic urothelial carcinoma by analyzing spatial TIL patterns from standard pathology slides. These findings position UC-TIL as a readily deployable tool to guide personalized therapy across multiple clinical settings.
Authors
- Omar Y. Mian (ORCID: https://orcid.org/0000-0002-8133-8120)
- Shilpa Gupta (ORCID: https://orcid.org/0000-0002-8775-503X)
- Kamal Hammouda (ORCID: https://orcid.org/0000-0003-1598-4287)
- Tilak Pathak (ORCID: https://orcid.org/0000-0002-9738-4172)
- Xavier Farré (ORCID: https://orcid.org/0000-0001-8702-4643)
- Tuomas Mirtti (ORCID: https://orcid.org/0000-0003-0455-9891)
- Germán Corredor (ORCID: https://orcid.org/0000-0003-3002-0937)
- Paul G. Pavicic (ORCID: https://orcid.org/0000-0002-5772-3192)
- Elizabeth M. Genega
- C. Marcela Díaz‐Montero (ORCID: https://orcid.org/0000-0002-6941-4215)
- Naoto Tokuyama (ORCID: https://orcid.org/0000-0002-7784-4901)
- Rishi Dakarapu
Institutions
- Cleveland Clinic (US)
- Helsinki University Hospital (FI)
- The Wallace H. Coulter Department of Biomedical Engineering (US)
- Fred Hutch Cancer Center (US)
Publication Details
- Journal
- Cancer Letters
- Published
- 2025-09-24
- DOI
- https://doi.org/10.1016/j.canlet.2025.218059
- Citations
- 1
- Primary Topic
- Colorectal Cancer Screening and Detection
- Type
- article
- Field-Weighted Citation Impact
- 1.05
Funders
- U.S. Department of Defense
- U.S. Department of Veterans Affairs
- Bristol-Myers Squibb
- Emory University
- National Institutes of Health
- Winship Cancer Institute
- National Cancer Institute