Exploring learning transferability in deep segmentation of colorectal cancer liver metastases

Ensuring the seamless transfer of knowledge and models across various datasets and clinical contexts is of paramount importance in medical image segmentation. This is especially true for liver lesion segmentation which plays a key role in pre-operative planning and treatment follow-up. Despite the progress of deep learning algorithms using Transformers, automatically segmenting small hepatic metastases remains a persistent challenge. This can be attributed to the degradation of small structures due to the intrinsic process of feature down-sampling inherent to many deep architectures, coupled with the imbalance between foreground metastases voxels and background. While similar challenges have been observed for liver tumors originated from hepatocellular carcinoma, their manifestation in the context of liver metastasis delineation remains under-explored and require well-defined guidelines. Through comprehensive experiments, this paper aims to bridge this gap and to demonstrate the impact of various transfer learning schemes from off-the-shelf datasets to a dataset containing liver metastases only. Our scale-specific evaluation reveals that models trained from scratch or with domain-specific pre-training demonstrate greater proficiency.

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Publication Details

Journal
Computers in Biology and Medicine
Published
2025-09-27
DOI
https://doi.org/10.1016/j.compbiomed.2025.111076
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
Field-Weighted Citation Impact
0.00

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article

Exploring learning transferability in deep segmentation of colorectal cancer liver metastases

Manuel Abbas, Bogdan Badic, Dimitris Visvikis, Vincent Jaouen et al.
Computers in Biology and Medicine
Radiomics and Machine Learning in Medical Imaging
article

Exploring learning transferability in deep segmentation of colorectal cancer liver metastases

Manuel Abbas, Bogdan Badic, Dimitris Visvikis, Vincent Jaouen, Gustavo Andrade-Miranda, Vincent Bourbonne, Pierre-Henri Conze
article en

Abstract

Ensuring the seamless transfer of knowledge and models across various datasets and clinical contexts is of paramount importance in medical image segmentation. This is especially true for liver lesion segmentation which plays a key role in pre-operative planning and treatment follow-up. Despite the progress of deep learning algorithms using Transformers, automatically segmenting small hepatic metastases remains a persistent challenge. This can be attributed to the degradation of small structures due to the intrinsic process of feature down-sampling inherent to many deep architectures, coupled with the imbalance between foreground metastases voxels and background. While similar challenges have been observed for liver tumors originated from hepatocellular carcinoma, their manifestation in the context of liver metastasis delineation remains under-explored and require well-defined guidelines. Through comprehensive experiments, this paper aims to bridge this gap and to demonstrate the impact of various transfer learning schemes from off-the-shelf datasets to a dataset containing liver metastases only. Our scale-specific evaluation reveals that models trained from scratch or with domain-specific pre-training demonstrate greater proficiency.

Computers in Biology and MedicineVol. 198(Pt A)
Inserm (FR), IMT Atlantique (FR), IMT Mines Alès (FR), Centre Hospitalier Régional Universitaire de Brest (FR), Laboratoire de Traitement de l'Information Médicale (FR)
Agence Nationale de la Recherche, Ligue Contre le Cancer, Grand Équipement National De Calcul Intensif
Openalex Percentile: Top 60%
Radiomics and Machine Learning in Medical Imaging
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