MOLECULAR CHARACTERIZATION AND TISSUE EXPRESSION OF THE <italic>BIM</italic> GENE IN <italic>MEGALOBRAMA AMBLYCEPHALA</italic> AND ITS RELATIONSHIP VERIFICATION WITH MAM-MIR-24-3

To elucidate the structure and function of the <italic>bim</italic> gene in <italic>Megalobrama amblycephala</italic>, this study obtained the full-length coding sequence (CDS) of <italic>bim</italic> through TA cloning and systematically analyzed the primary, secondary, and tertiary structural characteristics of Bim protein by using bioinformatics tools. Multiple sequence alignment revealed that the Bim protein of <italic>Megalobrama amblycephala</italic> exhibited the highest homology (98.34%) with that of <italic>Chanodichthys erythropterus</italic>, and a Neighbor-Joining phylogenetic tree further supported their closest evolutionary relationship. Tissue expression profiling demonstrated that both the <italic>bim</italic> gene and its putative regulatory factor mam-miR-24-3 were predominantly expressed in gill tissues compared to other organs. After 24h of hypoxia stress, their expression levels in gills were significantly upregulated, suggesting potential synergistic roles in hypoxia adaptation. Dual-luciferase reporter assays confirmed that mam-miR-24-3 directly bound to the 3′-untranslated region (3′-UTR) of <italic>bim</italic> mRNA, leading to reduced luciferase activity. When combined with fluorescence co-localization analysis using green fluorescent protein, these results indicated that mam-miR-24-3 negatively regulated <italic>bim</italic> expression at the post-transcriptional level. Subcellular localization experiments revealed that Bim protein predominantly localized to the nucleus under both normoxic and hypoxic conditions, implying its potential involvement in nuclear signaling pathways to directly regulate downstream gene transcription. This study provides a theoretical foundation for elucidating the molecular mechanisms by which <italic>bim</italic> contributes to hypoxia adaptation in <italic>Megalobrama amblycephala</italic> and lays the groundwork for screening molecular targets in hypoxia-tolerant breeding strategies.

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Publication Details

Journal
Acta Hydrobiologica Sinica
Published
2025-09-26
DOI
https://doi.org/10.3724/1000-3207.2025.2025.0077
Primary Topic
Aquaculture disease management and microbiota
Type
article
Field-Weighted Citation Impact
0.00

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article

MOLECULAR CHARACTERIZATION AND TISSUE EXPRESSION OF THE &lt;italic&gt;BIM&lt;/italic&gt; GENE IN &lt;italic&gt;MEGALOBRAMA AMBLYCEPHALA&lt;/italic&gt; AND ITS RELATIONSHIP VERIFICATION WITH MAM-MIR-24-3

Guo‐Dong Zheng, Si-Yu DING, Jie Chen, Shu‐Ming Zou et al.
Acta Hydrobiologica Sinica
Aquaculture disease management and microbiota
article

MOLECULAR CHARACTERIZATION AND TISSUE EXPRESSION OF THE &lt;italic&gt;BIM&lt;/italic&gt; GENE IN &lt;italic&gt;MEGALOBRAMA AMBLYCEPHALA&lt;/italic&gt; AND ITS RELATIONSHIP VERIFICATION WITH MAM-MIR-24-3

Guo‐Dong Zheng, Si-Yu DING, Jie Chen, Shu‐Ming Zou, Yijia Feng, Kemmadzong Foning LOIC
article en

Abstract

To elucidate the structure and function of the <italic>bim</italic> gene in <italic>Megalobrama amblycephala</italic>, this study obtained the full-length coding sequence (CDS) of <italic>bim</italic> through TA cloning and systematically analyzed the primary, secondary, and tertiary structural characteristics of Bim protein by using bioinformatics tools. Multiple sequence alignment revealed that the Bim protein of <italic>Megalobrama amblycephala</italic> exhibited the highest homology (98.34%) with that of <italic>Chanodichthys erythropterus</italic>, and a Neighbor-Joining phylogenetic tree further supported their closest evolutionary relationship. Tissue expression profiling demonstrated that both the <italic>bim</italic> gene and its putative regulatory factor mam-miR-24-3 were predominantly expressed in gill tissues compared to other organs. After 24h of hypoxia stress, their expression levels in gills were significantly upregulated, suggesting potential synergistic roles in hypoxia adaptation. Dual-luciferase reporter assays confirmed that mam-miR-24-3 directly bound to the 3′-untranslated region (3′-UTR) of <italic>bim</italic> mRNA, leading to reduced luciferase activity. When combined with fluorescence co-localization analysis using green fluorescent protein, these results indicated that mam-miR-24-3 negatively regulated <italic>bim</italic> expression at the post-transcriptional level. Subcellular localization experiments revealed that Bim protein predominantly localized to the nucleus under both normoxic and hypoxic conditions, implying its potential involvement in nuclear signaling pathways to directly regulate downstream gene transcription. This study provides a theoretical foundation for elucidating the molecular mechanisms by which <italic>bim</italic> contributes to hypoxia adaptation in <italic>Megalobrama amblycephala</italic> and lays the groundwork for screening molecular targets in hypoxia-tolerant breeding strategies.

Acta Hydrobiologica SinicaVol. 49(10)
National Natural Science Foundation of China, National Key Research and Development Program of China
Openalex Percentile: Top 72%
Aquaculture disease management and microbiota
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