Computational design of Fusarium solani cutinase variants for efficient polylactide and polyethylene terephtalate hydrolysis

Poly(lactic acid) (PLA) is among the most widely produced bioplastics worldwide and, given its limited biodegradability, sustainable solutions for its recycling are needed. The efficiency of enzymatic depolymerization depends on enzyme stability and activity under industrial conditions. This study focuses on engineering the cutinase from Fusarium solani (FsC), a promising enzyme for polyester hydrolysis, to enhance its thermostability and catalytic performance. Two computational strategies were employed: SCANEER, leveraging co-evolutionary analysis to optimize catalytic efficiency, and FireProt, integrating evolutionary and structural data to predict thermostabilizing mutations. The designed variants, FsC-sc (A32P/I55V) and FsC-fp (S54M/N106Y/S129A/S135P/S181L), were produced in Komagataella phaffii, evaluating their thermostability and depolymerizing activity. Compared to both the wild type and variant FsC-sc, FsC-fp exhibited superior thermal stability, maintaining full activity for 24 h at 50 °C and showing substantial resistance to deactivation at 60 °C. Additionally, FsC-fp demonstrated increased catalytic activity against PLA (23 % higher) and PET. Computational simulations aligned with experimental results, predicting higher k<sub>cat</sub> and binding affinity for the engineered variants. Structural analysis revealed that these mutations altered the geometry of the catalytic pocket, and increased surface hydrophobicity in FsC-fp, enhancing substrate interaction. This work highlights the efficacy of computational enzyme design in developing biocatalysts for industrial plastic recycling.

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Publication Details

Journal
International Journal of Biological Macromolecules
Published
2025-09-24
DOI
https://doi.org/10.1016/j.ijbiomac.2025.147822
Primary Topic
Microplastics and Plastic Pollution
Type
article
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article

Computational design of Fusarium solani cutinase variants for efficient polylactide and polyethylene terephtalate hydrolysis

Mario Garcı́a de Lacoba, Jorge Barriuso, Carlos Murguiondo, Alicia Prieto et al.
International Journal of Biological Macromolecules
Microplastics and Plastic Pollution
article

Computational design of Fusarium solani cutinase variants for efficient polylactide and polyethylene terephtalate hydrolysis

Mario Garcı́a de Lacoba, Jorge Barriuso, Carlos Murguiondo, Alicia Prieto, Alejandro García-Miró, Retzep Routsi
article en

Abstract

Poly(lactic acid) (PLA) is among the most widely produced bioplastics worldwide and, given its limited biodegradability, sustainable solutions for its recycling are needed. The efficiency of enzymatic depolymerization depends on enzyme stability and activity under industrial conditions. This study focuses on engineering the cutinase from Fusarium solani (FsC), a promising enzyme for polyester hydrolysis, to enhance its thermostability and catalytic performance. Two computational strategies were employed: SCANEER, leveraging co-evolutionary analysis to optimize catalytic efficiency, and FireProt, integrating evolutionary and structural data to predict thermostabilizing mutations. The designed variants, FsC-sc (A32P/I55V) and FsC-fp (S54M/N106Y/S129A/S135P/S181L), were produced in Komagataella phaffii, evaluating their thermostability and depolymerizing activity. Compared to both the wild type and variant FsC-sc, FsC-fp exhibited superior thermal stability, maintaining full activity for 24 h at 50 °C and showing substantial resistance to deactivation at 60 °C. Additionally, FsC-fp demonstrated increased catalytic activity against PLA (23 % higher) and PET. Computational simulations aligned with experimental results, predicting higher k<sub>cat</sub> and binding affinity for the engineered variants. Structural analysis revealed that these mutations altered the geometry of the catalytic pocket, and increased surface hydrophobicity in FsC-fp, enhancing substrate interaction. This work highlights the efficacy of computational enzyme design in developing biocatalysts for industrial plastic recycling.

International Journal of Biological MacromoleculesVol. 330(Pt 1)
Centro de Investigaciones Biológicas Margarita Salas (ES)
Openalex Percentile: Top 80%
Microplastics and Plastic Pollution
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