Detecting Beta-amyloid Plaque via Low Rank Based Orthogonal Projection and Spatial-spectrum Detector Using High-resolution Quantitative Susceptibility Mapping for Preclinical Studies

Detecting beta-amyloid (Aβ) plaques at different stages is crucial for accurate assessment and effective intervention in Alzheimer's disease (AD). In this study, we developed a novel method for reliably identifying Aβ plaques, characterized by sparse negative susceptibility values, in preclinical studies using high-resolution quantitative susceptibility mapping (QSM), named QSM-PLAQUE Aβ Detector. This approach decomposes a high-resolution QSM MRI image into three components: L (representing the background subspace), S (representing the signals subspace), and N (representing the noise). Subsequently, we established an orthogonal subspace based on L to eliminate the background from the sum of L and S. Finally, a plaque detection process was conducted, where Aβ plaques were identified based on the neighbor spectrum (NS) of a voxel being tested rather than just analyzing the voxel itself alone. Experiments demonstrated that the proposed method effectively detects Aβ plaques of varying shapes and intensities across the entire mouse brain. It shows robust performance across histology, highresolution QSM MRI, and synthesized datasets, without requiring training samples. The QSM-PLAQUE Aβ Detector provides a practical framework for identifying and visualizing Aβ plaques in preclinical studies, offering a new strategy for quantitative assessment of Aβ plaques and may guide the development of advanced techniques for preclinical AD research.

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Publication Details

Journal
IEEE Transactions on Biomedical Engineering
Published
2025-01-01
DOI
https://doi.org/10.1109/tbme.2025.3614233
Primary Topic
Computational Drug Discovery Methods
Type
article
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article

Detecting Beta-amyloid Plaque via Low Rank Based Orthogonal Projection and Spatial-spectrum Detector Using High-resolution Quantitative Susceptibility Mapping for Preclinical Studies

Mingquan Lin, J. Chen, Adrian L. Oblak, Rui Hu et al.
IEEE Transactions on Biomedical Engineering
Computational Drug Discovery Methods
article

Detecting Beta-amyloid Plaque via Low Rank Based Orthogonal Projection and Spatial-spectrum Detector Using High-resolution Quantitative Susceptibility Mapping for Preclinical Studies

Mingquan Lin, J. Chen, Adrian L. Oblak, Rui Hu, Randy R. Brutkiewicz, Xinyue Han, Season K. Wyatt‐Johnson, Nian Wang, C. Zhou, Zaiyi Liu, Saira Tabassam
article en

Abstract

Detecting beta-amyloid (Aβ) plaques at different stages is crucial for accurate assessment and effective intervention in Alzheimer's disease (AD). In this study, we developed a novel method for reliably identifying Aβ plaques, characterized by sparse negative susceptibility values, in preclinical studies using high-resolution quantitative susceptibility mapping (QSM), named QSM-PLAQUE Aβ Detector. This approach decomposes a high-resolution QSM MRI image into three components: L (representing the background subspace), S (representing the signals subspace), and N (representing the noise). Subsequently, we established an orthogonal subspace based on L to eliminate the background from the sum of L and S. Finally, a plaque detection process was conducted, where Aβ plaques were identified based on the neighbor spectrum (NS) of a voxel being tested rather than just analyzing the voxel itself alone. Experiments demonstrated that the proposed method effectively detects Aβ plaques of varying shapes and intensities across the entire mouse brain. It shows robust performance across histology, highresolution QSM MRI, and synthesized datasets, without requiring training samples. The QSM-PLAQUE Aβ Detector provides a practical framework for identifying and visualizing Aβ plaques in preclinical studies, offering a new strategy for quantitative assessment of Aβ plaques and may guide the development of advanced techniques for preclinical AD research.

IEEE Transactions on Biomedical EngineeringVol. PP
University of Minnesota (US), Southwestern Medical Center (US), Minnesota Department of Health (US), Advanced Imaging Research (United States) (US), Indiana University School of Medicine, McGill University (CA), Indiana University – Purdue University Indianapolis (US), The University of Texas Southwestern Medical Center (US)
Openalex Percentile: Top 73%
Computational Drug Discovery Methods
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