Multi-Domain Brain Vessel Segmentation Through Feature Disentanglement

The intricate morphology of brain vessels poses significant challenges for automatic segmentation models, which usually focus on a single imaging modality. However, accurately treating brain-related conditions requires a comprehensive understanding of the cerebrovascular tree regardless of the specific acquisition procedure. Through image-to-image translation, our framework effectively segments brain arteries and veins in various datasets, while avoiding domain-specific model design and data harmonization between the source and the target domain. This is accomplished by employing disentanglement techniques to independently manipulate different image properties, allowing to move from one domain to the other in a label-preserving manner. Specifically, we focus on the manipulation of vessel appearances during adaptation, while preserving spatial information such as shapes and locations, which are crucial for correct segmentation. Our evaluation demonstrates efficacy in bridging large and varied domain gaps across different medical centers, image modalities, and vessel types. Additionally, we conduct ablation studies on the optimal number of required annotations and other architectural choices. The results obtained highlight the robustness and versatility of our framework, demonstrating the potential of domain adaptation methodologies to perform cerebrovascular image segmentation accurately in multiple scenarios.

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Publication Details

Journal
The Journal of Machine Learning for Biomedical Imaging
Published
2025-09-09
DOI
https://doi.org/10.59275/j.melba.2025-4582
Primary Topic
Medical Image Segmentation Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Multi-Domain Brain Vessel Segmentation Through Feature Disentanglement

Rosa Cortese, María A. Zuluaga, Francesco Galati, Ninon Burgos et al.
The Journal of Machine Learning for Biomedical Imaging
Medical Image Segmentation Techniques
article

Multi-Domain Brain Vessel Segmentation Through Feature Disentanglement

Rosa Cortese, María A. Zuluaga, Francesco Galati, Ninon Burgos, Ferrán Prados, Daniele Falcetta
article en

Abstract

The intricate morphology of brain vessels poses significant challenges for automatic segmentation models, which usually focus on a single imaging modality. However, accurately treating brain-related conditions requires a comprehensive understanding of the cerebrovascular tree regardless of the specific acquisition procedure. Through image-to-image translation, our framework effectively segments brain arteries and veins in various datasets, while avoiding domain-specific model design and data harmonization between the source and the target domain. This is accomplished by employing disentanglement techniques to independently manipulate different image properties, allowing to move from one domain to the other in a label-preserving manner. Specifically, we focus on the manipulation of vessel appearances during adaptation, while preserving spatial information such as shapes and locations, which are crucial for correct segmentation. Our evaluation demonstrates efficacy in bridging large and varied domain gaps across different medical centers, image modalities, and vessel types. Additionally, we conduct ablation studies on the optimal number of required annotations and other architectural choices. The results obtained highlight the robustness and versatility of our framework, demonstrating the potential of domain adaptation methodologies to perform cerebrovascular image segmentation accurately in multiple scenarios.

The Journal of Machine Learning for Biomedical ImagingVol. 3(September 2025)
University of Siena (IT), Centre National de la Recherche Scientifique (FR), Universitat Oberta de Catalunya (ES), Inserm (FR), King's College London (GB), EURECOM (FR), Sorbonne Université (FR), Assistance Publique – Hôpitaux de Paris (FR), Institut de Myologie (FR), Pitié-Salpêtrière Hospital (FR), Institut du Cerveau (FR), University College London (GB)
National Institute for Health and Care Research, Guarantors of Brain, University College London, Agence Nationale de la Recherche, University College London Hospitals NHS Foundation Trust
Openalex Percentile: Top 74%
Medical Image Segmentation Techniques
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