Advancing Zebrafish Behavioral Analysis: A Synergistic YOLOv8-DeepSORT Framework for Precision Tracking

Multiple Object Tracking (MOT) faces significant challenges in accurately tracking small, fast-moving, and visually similar objects like zebrafish (Danio rerio) i n complex environments marked by occlusions, lighting variations, and unpredictable movements. An integrated MOT system proposed in this research uses K-means clustering for unsupervised trajectory classification, DeepSORT with a refined ResNet50 for dependable multi-object tracking, and YOLOv8 for robust object recognition to improve zebrafish behavioral a nalysis. With a mean Average Precision ([email protected]) of 96.5% in detection, an ID Switch Rate (IDSR) of 2.4% in tracking, and a silhouette score of 0.68 for trajectory clustering, this framework demonstrates strong performance. Heatmap analysis highlights important meeting places and clarifies spatial mobility patterns. The method improves real-time tracking and behavioral analysis by reducing occlusion and ID switching.

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Published
2025-07-12
DOI
https://doi.org/10.1109/imsa65733.2025.11167030
Primary Topic
Water Quality Monitoring Technologies
Type
article
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article

Advancing Zebrafish Behavioral Analysis: A Synergistic YOLOv8-DeepSORT Framework for Precision Tracking

Ayman Atia, Hanan Tarek, Haidy Aboud
Water Quality Monitoring Technologies
article

Advancing Zebrafish Behavioral Analysis: A Synergistic YOLOv8-DeepSORT Framework for Precision Tracking

Ayman Atia, Hanan Tarek, Haidy Aboud
article en

Abstract

Multiple Object Tracking (MOT) faces significant challenges in accurately tracking small, fast-moving, and visually similar objects like zebrafish (Danio rerio) i n complex environments marked by occlusions, lighting variations, and unpredictable movements. An integrated MOT system proposed in this research uses K-means clustering for unsupervised trajectory classification, DeepSORT with a refined ResNet50 for dependable multi-object tracking, and YOLOv8 for robust object recognition to improve zebrafish behavioral a nalysis. With a mean Average Precision ([email protected]) of 96.5% in detection, an ID Switch Rate (IDSR) of 2.4% in tracking, and a silhouette score of 0.68 for trajectory clustering, this framework demonstrates strong performance. Heatmap analysis highlights important meeting places and clarifies spatial mobility patterns. The method improves real-time tracking and behavioral analysis by reducing occlusion and ID switching.

October University of Modern Sciences and Arts (EG)
Openalex Percentile: Top 76%
Water Quality Monitoring Technologies
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Advancing Zebrafish Behavioral Analysis: A Synergistic YOLOv8-DeepSORT Framework for Precision Tracking — Ayman Atia, Hanan Tarek, et al. · (2025) | TGRS Research Map | TGRS