Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models
The transcription factor level data used for performing the reported study is accessible in the input files in Zenodo and GitHub as well the full code. Additional data from formerly FlyEx database will be available under request.
Authors
- Ah‐Ram Kim (ORCID: https://orcid.org/0000-0001-8938-751X)
- John Reinitz (ORCID: https://orcid.org/0000-0002-6314-9510)
- Alexandre F. Ramos (ORCID: https://orcid.org/0000-0003-4681-3069)
- Alan U. Sabino (ORCID: https://orcid.org/0000-0003-1094-5078)
- Drielly de Moraes Guerreiro
Institutions
- Handong Global University (KR)
- Universidade de São Paulo (BR)
- University of Illinois Chicago (US)
- University of Chicago (US)
- Instituto do Câncer do Estado de São Paulo (BR)
- Ecologie & Evolution (FR)
- Centro Universitário Belas Artes de São Paulo (BR)
- Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (BR)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-09-24
- DOI
- https://doi.org/10.1093/bioinformatics/btaf534
- Primary Topic
- Genomics and Chromatin Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00