Somatic TEK Mutation Identified in a Patient with Calvarial Venous Malformations
<b>Background</b>: Calvarial venous malformations (VMs) are rare and genetically understudied. While somatic <i>TEK receptor tyrosine kinase</i> (<i>TEK</i>) mutations drive sporadic VMs, their role in scalp-calvarial VMs is unknown. We report the first pediatric case of a calvarial VM with a pathogenic somatic <i>TEK</i> mutation and its molecular implications. <b>Methods</b>: A 16-year-old female with a symptomatic parietal scalp VM underwent neurosurgical resection. Exome sequencing was performed on both lesional and blood DNA. Single-cell RNA sequencing (scRNA-seq) data from normal brain vasculature were analyzed for <i>TEK</i> expression and pathway enrichment. <b>Results</b>: A novel somatic <i>TEK</i> L914F mutation (chr9:27212760-C-T [GRCh38]), absent in germline DNA and population databases, was identified and predicted to be deleterious (CADD: 24). scRNA-seq data analysis revealed <i>TEK</i> enrichment in endothelial cells, particularly in fetal and arterial subtypes, and implicated angiogenesis and PI3K/Rho signaling as potential downstream phenotypic and molecular consequences. <b>Conclusions</b>: This first pediatric scalp VM with a somatic <i>TEK</i> L914F mutation expands the phenotypes associated with <i>TEK</i>-related vascular anomalies. These findings emphasize the role of somatic <i>TEK</i> mutation in diverse VMs and support genetic testing in sporadic cases. Further studies are needed to define therapeutic targets.
Authors
- A Narayana Swamy
- Baojian Fan (ORCID: https://orcid.org/0000-0002-6851-2737)
- William Muñoz (ORCID: https://orcid.org/0000-0002-1354-3472)
- Evan Dennis (ORCID: https://orcid.org/0000-0002-9741-9275)
- Kristopher T. Kahle (ORCID: https://orcid.org/0000-0002-5922-7547)
- Andrew T. Hale (ORCID: https://orcid.org/0000-0003-3182-2966)
- Camilo E. Jaimes (ORCID: https://orcid.org/0000-0002-7169-4244)
- Neel H. Mehta (ORCID: https://orcid.org/0000-0002-5144-4635)
- Carla Fortes
- William Davalan
Institutions
- Broad Institute (US)
- Harvard University (US)
- University of Cape Town (ZA)
- University of Alabama at Birmingham (US)
- Massachusetts General Hospital (US)
Publication Details
- Journal
- Genes
- Published
- 2025-09-23
- DOI
- https://doi.org/10.3390/genes16101123
- Primary Topic
- Vascular Malformations Diagnosis and Treatment
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Massachusetts General Hospital
- Rudi Schulte Research Institute
- National Institutes of Health