Decoding butyrate fermentation with glucose as a model substrate: Parameter optimization and metagenomic insights

Selective butyrate production via anaerobic fermentation holds promise for sustainable biochemicals. Despite butyrate frequently accumulate in anaerobic systems, its mechanisms and optimal conditions remain unclear. To address this gap, batch experiments with glucose were conducted to explore the effect of pH (4.5-7.0 and 8.5-11.0), temperature (37 °C and 55 °C) and inoculum-to-substrate ratio (ISR; 3:1, 2:1, 1:1, 1:2, and 1:3) on butyrate production. The results indicated that the optimal conditions were pH 5.5, 37 °C, and an ISR of 1:3, refining previously inconsistent reports. Metagenomic analysis demonstrated that temperature and ISR significantly influenced microbial communities, identifying key butyrate producers: Clostridium, Caproicibacter, Caproicibacterium, Sporolactobacillus, and Ethanoligenens. The functional gene analysis revealed enriched reverse β-oxidation genes under optimal conditions, highlighting the key role of carbon chain elongation in butyrate production. These findings provide mechanistic insights into butyrate biosynthesis and practical strategies for improving selective butyrate production in anaerobic fermentation.

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Publication Details

Journal
Bioresource Technology
Published
2025-09-23
DOI
https://doi.org/10.1016/j.biortech.2025.133365
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
Field-Weighted Citation Impact
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article

Decoding butyrate fermentation with glucose as a model substrate: Parameter optimization and metagenomic insights

Xiaoxiao Shi, Maria G. Tuohy, Éric Trably, Xinmin Zhan et al.
Bioresource Technology
Microbial Metabolic Engineering and Bioproduction
article

Decoding butyrate fermentation with glucose as a model substrate: Parameter optimization and metagenomic insights

Xiaoxiao Shi, Maria G. Tuohy, Éric Trably, Xinmin Zhan, Shohei Yasuda, Yuansheng Hu, Zhongzhong Wang, Piet N.L. Lens
article en

Abstract

Selective butyrate production via anaerobic fermentation holds promise for sustainable biochemicals. Despite butyrate frequently accumulate in anaerobic systems, its mechanisms and optimal conditions remain unclear. To address this gap, batch experiments with glucose were conducted to explore the effect of pH (4.5-7.0 and 8.5-11.0), temperature (37 °C and 55 °C) and inoculum-to-substrate ratio (ISR; 3:1, 2:1, 1:1, 1:2, and 1:3) on butyrate production. The results indicated that the optimal conditions were pH 5.5, 37 °C, and an ISR of 1:3, refining previously inconsistent reports. Metagenomic analysis demonstrated that temperature and ISR significantly influenced microbial communities, identifying key butyrate producers: Clostridium, Caproicibacter, Caproicibacterium, Sporolactobacillus, and Ethanoligenens. The functional gene analysis revealed enriched reverse β-oxidation genes under optimal conditions, highlighting the key role of carbon chain elongation in butyrate production. These findings provide mechanistic insights into butyrate biosynthesis and practical strategies for improving selective butyrate production in anaerobic fermentation.

Bioresource TechnologyVol. 439
University College Dublin (IE), Universitat Autònoma de Barcelona (ES), Ollscoil na Gaillimhe – University of Galway (IE), Université de Montpellier (FR), IHE Delft Institute for Water Education (NL), Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR), Laboratoire de Biotechnologie de l'Environnement (FR)
Openalex Percentile: Top 77%
Microbial Metabolic Engineering and Bioproduction
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