Influence of ionic liquids on enzymatic asymmetric carboligations
The asymmetric mixed carboligation of aldehydes catalyzed by thiamine diphosphate (ThDP)-dependent enzymes provides a sensitive system for monitoring changes in activity, chemo-, and enantioselectivity. While previous studies have shown that organic cosolvents influence these parameters, we now demonstrate that similar effects occur upon addition of water-miscible ionic liquids (ILs). In this study, six ThDP-dependent enzymes were analyzed in the presence of 14 ILs under comparable conditions to assess their influence on enzymatic carboligation reactions yielding 2-hydroxy ketones. ILs exerted a moderate to strong influence on activity and, more notably, altered enantioselectivity. (<i>R</i>)-selective reactions were generally stable upon IL addition, while (<i>S</i>)-selective reactions frequently showed reduced selectivity or even inversion to the (<i>R</i>)-enantiomer. The most significant change was observed for the <i>Ap</i>PDC_E469G variant of pyruvate decarboxylase from <i>Acetobacter pasteurianus</i>, where the enantiomeric excess shifted from 86 % (<i>S</i>) to 60 % (<i>R</i>) in the presence of 9 % (w/v) Ammoeng 102. Control experiments indicated that this shift was primarily due to the Ammoeng cation rather than the anion. To explore the molecular basis of this phenomenon, all-atom molecular dynamics (MD) simulations were performed on wild-type <i>Ap</i>PDC and the E469G variant in Ammoeng 101 and Ammoeng 102. The simulations revealed that hydrophobic and hydrophilic regions of the Ammoeng cations interact with the (<i>S</i>)-selective binding pocket, thereby favoring formation of the (<i>R</i>)-product. These results highlight the potential of solvent engineering for modulating enzyme selectivity and demonstrate that MD simulations can capture functionally relevant enzyme-solvent interactions at the atomic level.
Authors
- Vicente Gotor‐Fernández (ORCID: https://orcid.org/0000-0002-9998-0656)
- Andreas Klein (ORCID: https://orcid.org/0000-0001-8075-3480)
- Iván Lavandera (ORCID: https://orcid.org/0000-0003-4857-4428)
- Dörte Rother (ORCID: https://orcid.org/0000-0002-2339-4431)
- Tina Gerhards
- Till El Harrar (ORCID: https://orcid.org/0000-0002-2474-7614)
- Holger Gohlke (ORCID: https://orcid.org/0000-0001-8613-1447)
- Eric von Lieres (ORCID: https://orcid.org/0000-0002-0309-8408)
- Martina Pohl (ORCID: https://orcid.org/0000-0001-9935-5183)
- Jörg Pietruszka (ORCID: https://orcid.org/0000-0002-9819-889X)
- Caroline E. Paul (ORCID: https://orcid.org/0000-0002-7889-9920)
Institutions
- Universidad de Oviedo (ES)
- Forschungszentrum Jülich (DE)
- Heinrich Heine University Düsseldorf (DE)
- RWTH Aachen University (DE)
- Delft University of Technology (NL)
Publication Details
- Journal
- Computational and Structural Biotechnology Journal
- Published
- 2025-01-01
- DOI
- https://doi.org/10.1016/j.csbj.2025.09.029
- Primary Topic
- Lubricants and Their Additives
- Type
- article
- Field-Weighted Citation Impact
- 0.00